Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41162 Brassica carinata HOM05D000624 ORTHO05D000495 2.1e-38 162.5 128 100.0
BcaB08g34976 Brassica carinata HOM05D000624 ORTHO05D000495 4.8e-19 98.2 93 94.6
Sp4g00440 Schrenkiella parvula HOM05D000624 ORTHO05D000495 1.6e-14 83.2 91 89.0
Thhalv10000273m.g Eutrema salsugineum HOM05D000624 ORTHO05D000495 2.1e-14 82.8 91 87.9
Aa31LG7G15240 Aethionema arabicum HOM05D000624 ORTHO05D000495 4.7e-14 81.6 91 87.9
AL4G10380 Arabidopsis lyrata HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 87.9
AT2G21240 Arabidopsis thaliana HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 87.9
A04p16030 Brassica napus HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 89.0
C04p50460 Brassica napus HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 89.0
BolC4t26643H Brassica oleracea HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 89.0
Carub.0004s0029 Capsella rubella HOM05D000624 ORTHO05D000495 6.1e-14 81.3 91 87.9
CARHR112110 Cardamine hirsuta HOM05D000624 ORTHO05D000495 1.7e-11 73.2 91 82.4
THA.LOC104824787 Tarenaya hassleriana HOM05D000624 ORTHO05D000495 9.1e-10 67.4 89 82.0
THA.LOC104807776 Tarenaya hassleriana HOM05D000624 ORTHO05D000495 1.6e-09 66.6 36 83.3
Cpa.g.sc150.9 Carica papaya HOM05D000624 ORTHO05D000495 2.7e-09 65.9 89 80.9
Thhalv10025867m.g Eutrema salsugineum HOM05D000624 ORTHO05D000495 2.7e-09 65.9 34 85.3
Sp7g36930 Schrenkiella parvula HOM05D000624 ORTHO05D000495 2.7e-09 65.9 34 85.3
BcaC01g00264 Brassica carinata HOM05D000624 ORTHO05D000495 4.5e-09 65.1 34 82.4
THA.LOC104804108 Tarenaya hassleriana HOM05D000624 ORTHO05D000495 4.5e-09 65.1 33 84.8
BcaB03g12232 Brassica carinata HOM05D000624 ORTHO05D000495 5.9e-09 64.7 34 82.4
A08p23940 Brassica napus HOM05D000624 ORTHO05D000495 5.9e-09 64.7 34 82.4
C03p77400 Brassica napus HOM05D000624 ORTHO05D000495 5.9e-09 64.7 34 82.4
BolC3t19996H Brassica oleracea HOM05D000624 ORTHO05D000495 5.9e-09 64.7 34 82.4
BraA08t34352Z Brassica rapa HOM05D000624 ORTHO05D000495 5.9e-09 64.7 34 82.4
CARHR247850 Cardamine hirsuta HOM05D000624 ORTHO05D000495 1.0e-08 63.9 43 69.8
Aa31LG6G16340 Aethionema arabicum HOM05D000624 ORTHO05D000495 1.7e-08 63.2 34 82.4
AL7G10800 Arabidopsis lyrata HOM05D000624 ORTHO05D000495 1.7e-08 63.2 34 85.3
BcaNung01956 Brassica carinata HOM05D000624 ORTHO05D000495 2.2e-08 62.8 88 80.7
C07p63500 Brassica napus HOM05D000624 ORTHO05D000495 6.5e-08 61.2 33 84.8
Potri.004G163700 Populus trichocarpa HOM05D000624 ORTHO05D000495 8.5e-08 60.8 91 74.7
Gohir.D13G091000 Gossypium hirsutum HOM05D000624 ORTHO05D000495 1.1e-07 60.5 34 76.5
Gorai.001G243700 Gossypium raimondii HOM05D000624 ORTHO05D000495 1.1e-07 60.5 34 76.5
BcaNung01295 Brassica carinata HOM05D000624 ORTHO05D000495 1.5e-07 60.1 88 79.5
CiPaw.06G127500 Carya illinoinensis HOM05D000624 ORTHO05D000495 1.5e-07 60.1 93 75.3
Duzib052G1043 Durio zibethinus HOM05D000624 ORTHO05D000495 1.5e-07 60.1 34 76.5
Atru.chr5.3160 Acer truncatum HOM05D000624 ORTHO05D000495 1.9e-07 59.7 34 73.5
Atru.chr5.3172 Acer truncatum HOM05D000624 ORTHO05D000495 1.9e-07 59.7 34 73.5
Ciclev10028887m.g Citrus clementina HOM05D000624 ORTHO05D000495 1.9e-07 59.7 35 71.4
A06p48840 Brassica napus HOM05D000624 ORTHO05D000495 3.2e-07 58.9 32 84.4
BolC7t46764H Brassica oleracea HOM05D000624 ORTHO05D000495 3.2e-07 58.9 32 84.4
BraA06t27752Z Brassica rapa HOM05D000624 ORTHO05D000495 3.2e-07 58.9 32 84.4
Duzib248G0498 Durio zibethinus HOM05D000624 ORTHO05D000495 3.2e-07 58.9 44 65.9
Sabra04G0109900 Salix brachista HOM05D000624 ORTHO05D000495 3.2e-07 58.9 91 73.6
Gohir.A13G086445 Gossypium hirsutum HOM05D000624 ORTHO05D000495 5.5e-07 58.2 34 76.5
Haze_02229 Corylus avellana HOM05D000624 ORTHO05D000495 7.2e-07 57.8 91 75.8
Thecc.02G073700 Theobroma cacao HOM05D000624 ORTHO05D000495 9.4e-07 57.4 89 77.5
Duzib132G0176 Durio zibethinus HOM05D000624 ORTHO05D000495 1.6e-06 56.6 34 73.5
Potri.009G125300 Populus trichocarpa HOM05D000624 ORTHO05D000495 2.1e-06 56.2 91 72.5
CiPaw.05G074100 Carya illinoinensis HOM05D000624 ORTHO05D000495 2.7e-06 55.8 91 74.7
Manes.04G082700 Manihot esculenta HOM05D000624 ORTHO05D000495 2.7e-06 55.8 93 71.0
TWI75G1242 Tripterygium wilfordii HOM05D000624 ORTHO05D000495 3.6e-06 55.5 91 75.8
FAN15G2180 Fragaria x ananassa HOM05D000624 ORTHO05D000495 8.0e-06 54.3 91 75.8
FAN20G1100 Fragaria x ananassa HOM05D000624 ORTHO05D000495 8.0e-06 54.3 91 75.8
FAN27G3222 Fragaria x ananassa HOM05D000624 ORTHO05D000495 8.0e-06 54.3 91 75.8
Sabra09G0096300 Salix brachista HOM05D000624 ORTHO05D000495 8.0e-06 54.3 35 65.7
TWI31G0617 Tripterygium wilfordii HOM05D000624 ORTHO05D000495 8.0e-06 54.3 92 75.0


User provided reference genes

Program Settings