Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41071 Brassica carinata HOM05D000509 ORTHO05D032338 1.5e-47 192.6 99 100.0
C08p40730 Brassica napus HOM05D000075 ORTHO05D032338 1.4e-45 186.0 95 100.0
BolC8t51638H Brassica oleracea HOM05D000075 ORTHO05D032338 1.4e-45 186.0 95 100.0
BcaC05g27864 Brassica carinata HOM05D000770 ORTHO05D000586 6.3e-35 150.6 87 90.8
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 1.3e-19 99.8 57 91.2
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 1.3e-19 99.8 57 91.2
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 1.3e-19 99.8 57 91.2
C09p52170 Brassica napus HOM05D000770 ORTHO05D000586 2.9e-19 98.6 59 86.4
BolC4t28275H Brassica oleracea HOM05D000770 ORTHO05D006393 1.1e-18 96.7 58 86.2
BolC3t17235H Brassica oleracea HOM05D000770 ORTHO05D000586 5.4e-18 94.4 58 84.5
A09p02720 Brassica napus HOM05D000770 ORTHO05D000586 6.0e-17 90.9 56 85.7
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 2.3e-16 89.0 58 81.0
BolC5t32602H Brassica oleracea HOM05D000770 ORTHO05D000586 3.3e-15 85.1 45 93.3
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 3.1e-13 78.6 43 88.4
C05p38620 Brassica napus HOM05D000770 ORTHO05D000586 4.4e-12 74.7 45 86.7
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 6.4e-11 70.9 61 68.9
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 4.1e-10 68.2 43 76.7
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 7.1e-10 67.4 43 76.7
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 1.3e-08 63.2 60 65.0
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 2.3e-08 62.4 43 74.4
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 3.0e-08 62.0 43 72.1
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 3.0e-08 62.0 43 72.1
AL5G43630 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 6.6e-08 60.8 43 72.1
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 9.5e-07 57.0 43 72.1
BcaC09g52246 Brassica carinata HOM05D000509 ORTHO05D006393 9.5e-07 57.0 43 72.1
AL1G53560 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 3.6e-06 55.1 43 65.1
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 4.7e-06 54.7 43 67.4
BolC4t24686H Brassica oleracea HOM05D000509 ORTHO05D006393 4.7e-06 54.7 37 73.0


User provided reference genes

Program Settings