Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 6.2e-299 1030.0 520 100.0
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 4.9e-296 1020.4 520 99.4
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 5.6e-284 980.3 520 96.5
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 3.8e-272 941.0 538 91.4
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 2.2e-259 898.7 548 85.9
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 6.3e-251 870.5 501 91.2
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 1.8e-242 842.4 548 81.0
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 1.7e-240 835.9 545 80.6
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 1.5e-239 832.8 546 80.6
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 1.9e-239 832.4 546 80.4
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 3.2e-239 831.6 534 81.1
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 2.7e-238 828.6 545 80.0
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 1.2e-225 786.6 547 75.7
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 5.6e-223 777.7 550 74.7
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 9.5e-223 776.9 547 75.0
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 1.8e-221 772.7 555 73.3
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 1.9e-210 736.1 544 73.5
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 6.6e-208 727.6 501 75.0
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 8.1e-198 694.1 553 67.1
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 2.1e-174 616.3 559 59.6
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 2.6e-172 609.4 551 58.4
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 1.7e-171 606.7 557 57.3
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 2.5e-170 602.8 533 59.8
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 2.5e-170 602.8 554 58.7
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 1.2e-169 600.5 550 59.1
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 2.1e-169 599.7 550 57.1
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 2.7e-169 599.4 550 58.0
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 4.6e-169 598.6 554 58.5
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 1.8e-168 596.7 552 58.3
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.0e-168 595.9 549 58.5
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 3.3e-167 592.4 568 56.2
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 4.3e-167 592.0 544 58.6
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 1.3e-166 590.5 546 58.4
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 2.1e-166 589.7 554 57.9
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 1.5e-164 583.6 540 55.7
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 3.4e-164 582.4 560 57.3
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 3.4e-164 582.4 550 57.3
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 5.8e-164 581.6 566 57.6
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 7.6e-164 581.3 530 58.1
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 3.8e-163 578.9 552 56.7
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.9e-162 576.6 544 58.1
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 2.5e-162 576.2 526 56.3
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 1.0e-160 570.9 561 55.8
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 1.0e-160 570.9 549 57.0
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 1.3e-160 570.5 554 55.1
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 1.8e-160 570.1 546 57.7
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 3.9e-160 568.9 546 57.5
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 1.1e-159 567.4 554 55.6
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 3.3e-159 565.8 536 57.5
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 3.3e-159 565.8 541 57.5
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 4.3e-159 565.5 554 55.2
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 1.3e-158 563.9 552 56.0
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 1.8e-157 560.1 549 55.4
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.8e-157 560.1 552 55.4
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 4.1e-157 558.9 532 54.9
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 6.9e-157 558.1 551 56.1
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 2.9e-155 552.7 555 54.2
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 3.8e-155 552.4 554 55.6
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 5.0e-155 552.0 544 56.4
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 6.5e-155 551.6 549 55.9
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 2.5e-154 549.7 547 54.5
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 2.7e-153 546.2 559 53.3
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 1.0e-152 544.3 520 57.1
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.5e-151 540.4 536 54.7
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 2.0e-151 540.0 525 56.0
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 3.3e-151 539.3 536 54.7
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 3.3e-151 539.3 542 53.9
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 4.3e-151 538.9 564 53.7
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 4.3e-151 538.9 545 53.9
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 9.7e-151 537.7 536 54.7
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.3e-150 537.3 545 55.0
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 3.7e-150 535.8 563 53.5
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 6.3e-150 535.0 555 53.3
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 1.8e-149 533.5 531 53.3
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 1.8e-149 533.5 547 52.1
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 4.1e-149 532.3 549 54.5
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 9.1e-149 531.2 571 52.9
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 1.2e-148 530.8 565 54.5
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 1.2e-148 530.8 541 53.6
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 5.9e-148 528.5 541 53.4
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.0e-147 527.7 519 53.8
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 2.2e-147 526.6 541 53.2
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 8.5e-147 524.6 552 51.8
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 1.4e-146 523.9 534 52.4
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 2.1e-145 520.0 560 51.8
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.6e-145 519.2 557 53.1
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.1e-145 518.5 594 51.7
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 7.9e-145 518.1 472 56.4
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 1.8e-144 516.9 557 51.9
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 1.5e-143 513.8 463 57.0
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 4.4e-143 512.3 537 54.0
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.7e-139 500.4 558 52.2
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 3.2e-138 496.1 526 51.5
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 9.4e-138 494.6 551 50.3
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 1.6e-137 493.8 529 51.2
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 2.3e-136 490.0 580 47.6
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 4.0e-136 489.2 582 47.9
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 1.5e-135 487.3 479 55.5
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 3.3e-135 486.1 448 54.9
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 1.1e-133 481.1 626 45.4
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 3.1e-133 479.6 484 55.0
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.0e-132 476.9 549 47.4
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 1.0e-131 474.6 494 53.6
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 5.0e-131 472.2 598 44.8
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 1.9e-130 470.3 520 48.5
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.6e-129 467.2 480 51.0
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 6.8e-128 461.8 567 47.8
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 4.4e-127 459.1 467 50.1
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 1.4e-125 454.1 460 52.0
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 2.4e-125 453.4 530 50.9
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 2.4e-125 453.4 517 49.5
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 1.0e-123 448.0 510 50.8
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.3e-118 431.0 556 47.5
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 7.7e-116 421.8 547 46.1
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 5.0e-115 419.1 551 45.9
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 5.2e-112 409.1 460 52.6
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 2.7e-108 396.7 532 42.5
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 2.7e-108 396.7 436 50.0
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.3e-107 394.4 575 40.3
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.3e-107 394.4 575 40.3
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 4.7e-105 386.0 490 45.9
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.0e-104 384.8 572 39.0
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.8e-104 384.0 580 38.4
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 7.5e-103 378.6 460 50.7
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.4e-101 374.4 526 40.5
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 1.2e-97 361.3 492 41.7
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 3.6e-97 359.8 327 58.4
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 3.5e-92 343.2 536 40.3
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 1.1e-88 331.6 320 56.2
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 2.7e-84 317.0 349 48.7
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 5.1e-83 312.8 469 43.5
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 1.7e-70 271.2 707 29.8
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.8e-70 270.0 583 32.4
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 2.4e-69 267.3 168 75.0
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.4e-69 267.3 583 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 5.4e-69 266.2 457 38.5
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 9.3e-69 265.4 166 71.1
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 1.1e-58 231.9 393 41.2
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 9.0e-48 195.7 257 46.7
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 5.1e-43 179.9 196 53.1
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 1.1e-42 178.7 189 46.6
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 1.0e-38 165.6 164 57.9
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 2.3e-35 154.5 99 64.6
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 8.8e-35 152.5 272 37.5
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.6e-34 151.0 178 51.7
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 1.7e-33 148.3 145 57.9
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 7.7e-31 139.4 164 48.8
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.5e-29 134.4 160 50.0
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 7.9e-28 129.4 94 67.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.7e-25 121.7 128 51.6
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 6.5e-22 109.8 166 35.5
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 6.5e-22 109.8 180 35.6
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 8.8e-19 99.4 68 64.7
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 2.0e-15 88.2 104 49.0
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 3.8e-14 84.0 104 40.4
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 3.4e-10 70.9 39 79.5
Cre13.g585651 Chlamydomonas reinhardtii HOM05D004583 ORTHO05D005469 5.9e-07 60.1 115 34.8


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