Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40771 Brassica carinata HOM05D000086 ORTHO05D000311 3.1e-64 248.4 139 100.0
BcaC07g40748 Brassica carinata HOM05D000086 ORTHO05D000311 6.6e-46 187.6 107 100.0
C08p37460 Brassica napus HOM05D000086 ORTHO05D000311 6.8e-43 177.6 135 80.0
A09p54560 Brassica napus HOM05D000086 ORTHO05D000311 7.8e-39 164.1 135 75.6
BcaC07g40770 Brassica carinata HOM05D000086 ORTHO05D000311 2.6e-34 149.1 106 88.7
Thhalv10006175m.g Eutrema salsugineum HOM05D000086 ORTHO05D000311 1.5e-26 123.2 98 75.5
BolC8t51325H Brassica oleracea HOM05D000086 ORTHO05D000311 3.4e-26 122.1 135 54.1
AL5G45440 Arabidopsis lyrata HOM05D000086 ORTHO05D000311 8.4e-25 117.5 98 75.5
Sp5g00830 Schrenkiella parvula HOM05D000086 ORTHO05D000311 8.4e-25 117.5 83 81.9
AT3G62690 Arabidopsis thaliana HOM05D000086 ORTHO05D000311 2.4e-24 115.9 98 76.5
BcaB02g07326 Brassica carinata HOM05D000086 ORTHO05D000311 2.1e-23 112.8 79 87.3
C06p28370 Brassica napus HOM05D000086 ORTHO05D000311 2.7e-23 112.5 94 76.6
BcaC08g45216 Brassica carinata HOM05D000086 ORTHO05D000311 1.0e-22 110.5 94 75.5
BcaC08g45217 Brassica carinata HOM05D000086 ORTHO05D000311 1.0e-22 110.5 94 75.5
BolC6t38007H Brassica oleracea HOM05D000086 ORTHO05D000311 2.3e-22 109.4 94 75.5
BraA09t40868Z Brassica rapa HOM05D000086 ORTHO05D000311 2.3e-22 109.4 135 49.6
CARHR172960 Cardamine hirsuta HOM05D000086 ORTHO05D000311 3.0e-22 109.0 86 67.4
A07p26060 Brassica napus HOM05D000086 ORTHO05D000311 2.1e-20 102.8 75 81.3
BcaC08g45234 Brassica carinata HOM05D000086 ORTHO05D000311 2.8e-20 102.4 78 82.1
BraA07t30254Z Brassica rapa HOM05D000086 ORTHO05D000311 6.8e-19 97.8 75 84.0
Aa31LG10G16490 Aethionema arabicum HOM05D000157 ORTHO05D000311 1.1e-16 90.5 83 65.1
Carub.0005s2936 Capsella rubella HOM05D000086 ORTHO05D000311 3.9e-14 82.0 78 76.9
THA.LOC104802179 Tarenaya hassleriana HOM05D000086 ORTHO05D000311 2.4e-11 72.8 101 51.5
AL4G47140 Arabidopsis lyrata HOM05D000086 ORTHO05D000311 2.6e-10 69.3 50 70.0
A05p00360 Brassica napus HOM05D000086 ORTHO05D000311 2.2e-09 66.2 59 57.6
BraA05t19034Z Brassica rapa HOM05D000086 ORTHO05D000311 2.2e-09 66.2 59 57.6
Aa31LG1G28890 Aethionema arabicum HOM05D000086 ORTHO05D000311 1.1e-08 63.9 91 58.2
BcaC02g12605 Brassica carinata HOM05D000086 ORTHO05D000311 4.2e-08 62.0 59 55.9
AT2G47560 Arabidopsis thaliana HOM05D000086 ORTHO05D000311 9.3e-08 60.8 50 62.0
Sp4g29500 Schrenkiella parvula HOM05D000086 ORTHO05D000311 1.2e-07 60.5 71 57.7
BcaB02g08762 Brassica carinata HOM05D000086 ORTHO05D000311 1.0e-06 57.4 59 55.9
C04p00280 Brassica napus HOM05D000086 ORTHO05D000311 1.0e-06 57.4 59 55.9
BolC4t21671H Brassica oleracea HOM05D000086 ORTHO05D000311 1.0e-06 57.4 59 55.9
Carub.0004s3030 Capsella rubella HOM05D000086 ORTHO05D000311 1.3e-06 57.0 59 52.5
THA.LOC104817483 Tarenaya hassleriana HOM05D000086 ORTHO05D000311 3.9e-06 55.5 76 46.1
CARHR142970 Cardamine hirsuta HOM05D000086 ORTHO05D000311 5.1e-06 55.1 75 49.3


User provided reference genes

Program Settings