Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 1.7e-120 436.0 217 100.0
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 3.7e-120 434.9 217 99.5
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 1.4e-119 433.0 217 99.1
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 1.2e-118 429.9 217 98.2
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 1.2e-118 429.9 217 98.2
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 2.7e-110 402.1 219 92.2
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 2.2e-96 355.9 216 83.3
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 4.9e-96 354.8 217 81.1
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 2.4e-95 352.4 203 85.7
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 9.2e-95 350.5 203 85.2
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 2.9e-93 345.5 217 79.7
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 1.5e-92 343.2 203 84.2
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 1.5e-92 343.2 203 84.2
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 1.5e-92 343.2 203 83.7
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 4.7e-91 338.2 219 79.0
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 1.3e-88 330.1 218 77.1
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 9.5e-84 313.9 213 75.1
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 2.8e-83 312.4 217 74.2
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 2.3e-82 309.3 217 73.3
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 2.3e-82 309.3 217 73.3
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 2.0e-81 306.2 190 77.4
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 6.0e-70 268.1 198 69.2
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 1.8e-66 256.5 217 63.6
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.2e-62 243.8 229 59.4
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 3.9e-61 238.8 228 56.6
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 3.3e-60 235.7 227 57.3
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 1.1e-58 230.7 218 56.4
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 5.2e-58 228.4 218 57.3
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 5.2e-58 228.4 218 57.3
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 2.6e-57 226.1 218 56.4
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 2.6e-57 226.1 218 56.4
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 2.6e-57 226.1 218 56.4
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 3.4e-57 225.7 218 55.0
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 3.4e-57 225.7 218 56.0
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 7.6e-57 224.6 218 56.4
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 2.9e-56 222.6 216 56.0
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 2.9e-56 222.6 216 56.0
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 2.9e-56 222.6 216 56.0
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 3.8e-56 222.2 216 56.0
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 4.9e-56 221.9 218 55.5
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 4.9e-56 221.9 216 56.0
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 4.9e-56 221.9 218 55.5
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 8.4e-56 221.1 218 55.0
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 5.4e-55 218.4 216 55.1
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 5.4e-55 218.4 216 55.1
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 9.3e-55 217.6 221 54.8
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 2.7e-54 216.1 216 54.6
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 2.7e-54 216.1 216 54.6
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 8.4e-48 194.5 144 69.4
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 4.8e-19 99.0 187 33.2
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 4.8e-19 99.0 175 34.9
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 6.3e-19 98.6 166 34.9
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 6.3e-19 98.6 166 35.5
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 6.3e-19 98.6 166 34.9
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 1.1e-18 97.8 166 34.9
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 35.5
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 36.1
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 34.9
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 34.9
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 34.9
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 34.9
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 1.4e-18 97.4 166 34.3
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 2.4e-18 96.7 190 33.2
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 2.4e-18 96.7 190 33.2
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 3.1e-18 96.3 172 33.7
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 4.1e-18 95.9 166 34.9
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 5.3e-18 95.5 166 34.9
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 9.1e-18 94.7 166 34.9
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 9.1e-18 94.7 166 35.5
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 9.1e-18 94.7 166 36.1
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 9.1e-18 94.7 166 36.1
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 9.1e-18 94.7 166 35.5
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 9.1e-18 94.7 200 32.0
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 2.0e-17 93.6 192 31.8
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 7.7e-17 91.7 191 30.9
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.0e-16 91.3 197 30.5
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 1.7e-16 90.5 190 30.5
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 1.7e-16 90.5 190 30.5
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 1.7e-16 90.5 190 30.5
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 1.7e-16 90.5 190 30.5
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 2.9e-16 89.7 196 31.6
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 2.9e-16 89.7 207 28.5
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 6.5e-16 88.6 209 29.2
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 6.5e-16 88.6 164 32.3
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 8.5e-16 88.2 196 29.6
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 2.5e-15 86.7 168 32.7
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 3.2e-15 86.3 209 28.7
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 4.2e-15 85.9 190 31.6
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 4.2e-15 85.9 190 31.6
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 1.2e-14 84.3 209 31.1
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 1.8e-13 80.5 190 30.0
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 1.8e-13 80.5 190 30.0
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 2.3e-13 80.1 196 30.6
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 2.3e-13 80.1 196 30.6
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 3.0e-13 79.7 190 30.0
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 3.0e-13 79.7 197 30.5
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 2.0e-12 77.0 210 25.2
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 2.4e-10 70.1 196 28.1
Potri.001G209200 Populus trichocarpa HOM05D000036 ORTHO05D000441 3.4e-09 66.2 198 25.8
Sabra03G0012500 Salix brachista HOM05D000036 ORTHO05D000441 2.2e-08 63.5 201 24.4
Sabra01G0161400 Salix brachista HOM05D000036 ORTHO05D000441 3.8e-08 62.8 198 25.8
PSO210G6288 Papaver somniferum HOM05D000036 ORTHO05D000441 2.5e-07 60.1 146 28.1
PSO761G0155 Papaver somniferum HOM05D000036 ORTHO05D000441 3.2e-07 59.7 146 28.1
BcaC07g40709 Brassica carinata HOM05D000036 ORTHO05D000441 7.2e-07 58.5 98 36.7
EL10Ac4g09893 Beta vulgaris HOM05D000036 ORTHO05D000441 7.9e-06 55.1 167 28.7


User provided reference genes

Program Settings