Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40658 Brassica carinata HOM05D003721 ORTHO05D004303 7.3e-145 517.3 281 100.0
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 3.3e-60 236.1 307 56.7
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 1.2e-59 234.2 291 57.4
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 1.2e-59 234.2 307 56.4
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 2.1e-59 233.4 307 56.4
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 3.0e-58 229.6 292 57.5
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 4.4e-57 225.7 308 54.5
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 7.0e-55 218.4 305 54.4
BcaC07g40654 Brassica carinata HOM05D003721 ORTHO05D004303 9.8e-49 198.0 268 53.4
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 1.1e-47 194.5 293 50.5
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 6.8e-42 175.3 323 44.6
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 3.7e-40 169.5 293 47.1
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 3.2e-39 166.4 319 44.5
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 2.1e-38 163.7 316 44.3
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 7.8e-38 161.8 317 43.8
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 3.0e-37 159.8 315 42.9
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 1.9e-36 157.1 289 44.6
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 1.9e-31 140.6 294 42.2
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 4.1e-31 139.4 295 42.4
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 9.9e-25 118.2 284 39.8
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 2.2e-24 117.1 301 35.9
BcaC08g45137 Brassica carinata HOM05D003721 ORTHO05D004303 1.9e-23 114.0 134 59.0
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 4.6e-22 109.4 296 35.8
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 1.6e-19 100.9 296 33.4
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 2.4e-15 87.0 339 31.9
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 2.4e-15 87.0 302 33.1
Carub.0005s2826 Capsella rubella HOM05D003721 ORTHO05D004303 6.0e-14 82.4 116 51.7
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 5.1e-13 79.3 337 30.3
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 1.9e-12 77.4 292 31.5
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 5.6e-12 75.9 345 29.3
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 9.6e-12 75.1 296 31.8
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.6e-11 74.3 311 30.9
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 2.8e-11 73.6 286 31.1
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 1.4e-10 71.2 311 30.9
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 2.4e-10 70.5 262 32.1
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 6.9e-10 68.9 311 30.2
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 9.0e-10 68.6 305 31.1
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 1.2e-09 68.2 334 29.0
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 2.0e-09 67.4 309 30.1
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 2.0e-09 67.4 298 29.2
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 4.5e-09 66.2 350 29.4
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 4.5e-09 66.2 306 30.1
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 5.8e-09 65.9 350 29.4
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 5.8e-09 65.9 317 28.1
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 7.6e-09 65.5 344 29.1
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 7.6e-09 65.5 312 30.8
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 9.9e-09 65.1 322 29.5
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 1.3e-08 64.7 318 29.6
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 1.7e-08 64.3 312 28.5
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 2.2e-08 63.9 317 30.9
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.1e-07 61.6 320 26.2
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.1e-07 61.6 314 29.6
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.1e-07 61.6 277 30.0
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.4e-07 61.2 303 29.0
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 2.4e-07 60.5 324 27.8
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 4.2e-07 59.7 315 29.2
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 4.2e-07 59.7 306 29.4
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 4.2e-07 59.7 348 29.9
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 5.5e-07 59.3 283 29.7
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 5.5e-07 59.3 345 29.3
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 7.1e-07 58.9 262 31.3
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 9.3e-07 58.5 320 25.9
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 9.3e-07 58.5 342 26.3
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.2e-06 58.2 354 26.3
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 1.2e-06 58.2 341 28.7
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 1.2e-06 58.2 373 26.0
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.6e-06 57.8 294 28.9
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 1.6e-06 57.8 306 31.4
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 1.6e-06 57.8 340 27.6
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 2.1e-06 57.4 270 27.0
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 2.1e-06 57.4 245 29.4
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 2.7e-06 57.0 302 26.2
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 3.5e-06 56.6 252 30.2
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 7.9e-06 55.5 335 29.6


User provided reference genes

Program Settings