Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40644 Brassica carinata HOM05D001218 ORTHO05D020060 1.9e-43 178.7 87 100.0
BcaC07g40596 Brassica carinata HOM05D001218 ORTHO05D020060 1.5e-11 72.8 36 97.2
BcaC07g41739 Brassica carinata HOM05D001218 ORTHO05D003142 4.3e-11 71.2 57 68.4
BcaC07g41740 Brassica carinata HOM05D001218 ORTHO05D003142 4.3e-11 71.2 57 68.4
BcaC07g41742 Brassica carinata HOM05D001218 ORTHO05D003142 4.3e-11 71.2 57 68.4
C08p47780 Brassica napus HOM05D001218 ORTHO05D003142 4.3e-11 71.2 57 68.4
BolC8t52318H Brassica oleracea HOM05D001218 ORTHO05D003142 7.3e-11 70.5 55 70.9
BcaB02g06436 Brassica carinata HOM05D001218 ORTHO05D003142 9.6e-11 70.1 54 70.4
BcaC07g41755 Brassica carinata HOM05D001218 ORTHO05D003142 9.6e-11 70.1 68 57.4
C04p31780 Brassica napus HOM05D001218 ORTHO05D020060 1.6e-10 69.3 54 68.5
BolC4t24726H Brassica oleracea HOM05D001218 ORTHO05D020060 1.6e-10 69.3 54 68.5
C03p79160 Brassica napus HOM05D001218 ORTHO05D020060 2.1e-10 68.9 52 69.2
Thhalv10007237m.g Eutrema salsugineum HOM05D001218 ORTHO05D003142 3.6e-10 68.2 54 68.5
Sp1g10670 Schrenkiella parvula HOM05D001218 ORTHO05D003142 3.6e-10 68.2 54 68.5
BcaB02g10205 Brassica carinata HOM05D004192 ORTHO05D004917 6.2e-10 67.4 52 73.1
Carub.0001s1168 Capsella rubella HOM05D001218 ORTHO05D003142 1.8e-09 65.9 54 66.7
BcaC05g25234 Brassica carinata HOM05D001218 ORTHO05D003142 2.4e-09 65.5 54 66.7
A06p09480 Brassica napus HOM05D001218 ORTHO05D003142 2.4e-09 65.5 54 66.7
C05p11190 Brassica napus HOM05D001218 ORTHO05D003142 2.4e-09 65.5 54 66.7
BolC5t29865H Brassica oleracea HOM05D001218 ORTHO05D003142 2.4e-09 65.5 54 66.7
BraA06t24135Z Brassica rapa HOM05D001218 ORTHO05D003142 2.4e-09 65.5 54 66.7
CARHR012330 Cardamine hirsuta HOM05D001218 ORTHO05D003142 4.0e-09 64.7 54 64.8
AT1G12000 Arabidopsis thaliana HOM05D001218 ORTHO05D003142 9.0e-09 63.5 54 64.8
Aa31LG1G2740 Aethionema arabicum HOM05D001218 ORTHO05D003142 1.2e-08 63.2 54 64.8
BraA08t35229Z Brassica rapa HOM05D001218 ORTHO05D003142 1.2e-08 63.2 36 80.6
THA.LOC104809476 Tarenaya hassleriana HOM05D001218 ORTHO05D003142 2.2e-07 58.9 54 61.1
TAR629G1021 Trochodendron aralioides HOM05D001218 ORTHO05D003142 1.4e-06 56.2 55 61.8
THA.LOC104818616 Tarenaya hassleriana HOM05D001218 ORTHO05D003142 1.9e-06 55.8 54 63.0
GSVIVG01004820001 Vitis vinifera HOM05D001218 ORTHO05D003142 2.4e-06 55.5 53 58.5
CSS0017591 Camellia sinensis var. sinensis HOM05D001218 ORTHO05D003142 3.2e-06 55.1 55 60.0
Nn1g03386 Nelumbo nucifera HOM05D001218 ORTHO05D003142 3.2e-06 55.1 55 60.0
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 5.4e-06 54.3 55 60.0
TAR626G0797 Trochodendron aralioides HOM05D001218 ORTHO05D003142 5.4e-06 54.3 55 60.0
Oeu005202.1 Olea europaea HOM05D001218 ORTHO05D003142 7.1e-06 53.9 55 58.2
ClCG01G009730 Citrullus lanatus HOM05D001218 ORTHO05D003142 9.3e-06 53.5 67 52.2
RcHm_v2.0_Chr2g0158381 Rosa chinensis HOM05D001218 ORTHO05D003142 9.3e-06 53.5 58 53.4
Thecc.01G180900 Theobroma cacao HOM05D001218 ORTHO05D003142 9.3e-06 53.5 54 55.6


User provided reference genes

Program Settings