Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-133 479.9 253 100.0
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 8.1e-111 404.1 258 82.6
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 9.9e-109 397.1 258 81.8
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.3e-108 396.7 260 83.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-108 396.7 260 83.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.3e-108 396.7 260 83.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.5e-104 383.3 260 80.0
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 3.1e-102 375.6 260 79.6
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 4.0e-102 375.2 261 81.2
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 5.3e-102 374.8 261 80.8
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 3.4e-101 372.1 262 78.6
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 4.5e-101 371.7 261 80.5
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.9e-100 369.0 265 78.5
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 2.5e-96 355.9 263 76.0
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 7.9e-90 334.3 267 71.5
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 7.4e-88 327.8 266 68.0
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 2.4e-86 322.8 266 70.3
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.7e-84 316.6 264 71.6
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 3.8e-76 288.9 261 65.5
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 4.8e-71 271.9 262 57.6
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.6e-69 266.9 263 60.8
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 6.7e-65 251.5 197 67.5
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.7e-64 248.4 197 67.0
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 2.2e-63 246.5 193 65.3
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 4.8e-63 245.4 261 56.3
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 1.1e-62 244.2 183 64.5
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 2.4e-62 243.0 263 53.6
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.6e-61 240.4 267 55.1
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 1.6e-61 240.4 190 63.2
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 2.7e-61 239.6 223 57.0
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.5e-61 239.2 186 64.0
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.5e-61 239.2 186 64.0
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.5e-61 239.2 267 55.8
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 5.9e-61 238.4 186 65.1
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.0e-60 237.7 186 63.4
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.3e-60 237.3 270 54.8
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.2e-60 236.5 269 56.5
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 6.5e-60 235.0 243 55.1
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 3.2e-59 232.6 259 56.0
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 3.2e-59 232.6 252 56.3
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 3.2e-59 232.6 195 60.0
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 4.2e-59 232.3 261 52.9
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 5.5e-59 231.9 277 53.4
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 5.5e-59 231.9 200 61.0
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 9.4e-59 231.1 195 59.5
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 9.4e-59 231.1 225 54.2
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 9.4e-59 231.1 185 62.2
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.2e-58 230.7 262 51.5
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.7e-58 229.6 240 54.2
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 3.6e-58 229.2 266 50.8
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 3.6e-58 229.2 187 61.0
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 3.6e-58 229.2 271 51.3
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 3.6e-58 229.2 190 61.6
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 4.7e-58 228.8 272 54.0
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 4.7e-58 228.8 269 55.0
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 8.0e-58 228.0 276 49.6
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.0e-57 227.6 228 60.5
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 2.3e-57 226.5 182 63.2
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 2.3e-57 226.5 157 69.4
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 3.0e-57 226.1 265 49.8
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 4.0e-57 225.7 153 70.6
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.0e-57 225.7 261 55.6
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 4.0e-57 225.7 225 56.9
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 5.2e-57 225.3 193 61.1
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.2e-57 225.3 255 58.0
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.2e-57 225.3 255 58.0
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 8.8e-57 224.6 206 57.8
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.2e-56 224.2 260 53.1
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.2e-56 224.2 263 51.7
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 2.0e-56 223.4 195 58.5
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 2.0e-56 223.4 274 48.5
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.4e-56 222.6 258 53.5
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 3.4e-56 222.6 272 51.5
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 4.4e-56 222.2 184 60.3
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 4.4e-56 222.2 263 54.4
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 5.7e-56 221.9 261 54.0
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 7.5e-56 221.5 193 60.1
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 9.8e-56 221.1 194 59.8
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 9.8e-56 221.1 260 54.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 9.8e-56 221.1 198 58.6
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.3e-55 220.7 249 55.8
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.3e-55 220.7 262 48.9
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.7e-55 220.3 202 58.4
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.2e-55 219.9 268 49.6
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 2.2e-55 219.9 217 54.8
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 8.3e-55 218.0 258 54.3
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 1.1e-54 217.6 271 49.1
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.4e-54 217.2 261 53.3
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 2.4e-54 216.5 264 51.5
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 5.4e-54 215.3 265 47.5
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 7.0e-54 214.9 222 54.5
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 9.1e-54 214.5 205 56.1
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 3.5e-53 212.6 246 55.7
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 3.5e-53 212.6 230 54.8
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 4.5e-53 212.2 184 59.8
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 5.9e-53 211.8 261 49.0
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 7.7e-53 211.5 267 51.3
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 1.0e-52 211.1 189 57.1
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.7e-52 210.3 264 48.5
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 2.9e-52 209.5 226 54.4
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 3.3e-51 206.1 262 47.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 5.5e-51 205.3 219 54.3
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.6e-50 203.8 177 59.3
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 3.6e-50 202.6 262 50.4
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.3e-47 194.1 206 53.4
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.2e-45 187.6 234 48.7
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 8.6e-44 181.4 148 58.8
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 3.3e-43 179.5 274 49.6
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 3.7e-39 166.0 142 57.0
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.0e-36 157.9 240 45.0
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.7e-36 157.1 160 51.2
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.3e-36 156.8 254 44.1
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 3.0e-36 156.4 152 52.0
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 1.5e-35 154.1 139 56.1
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 3.3e-35 152.9 171 47.4
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 9.5e-35 151.4 147 47.6
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 2.8e-34 149.8 153 48.4
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 3.6e-34 149.4 157 47.1
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 2.9e-31 139.8 151 45.0
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 4.1e-30 136.0 165 41.8
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 3.4e-24 116.3 114 52.6
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 2.7e-21 106.7 109 54.1


User provided reference genes

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