Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 3.1e-67 258.5 141 100.0
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 3.1e-67 258.5 141 100.0
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 2.2e-65 252.3 141 97.2
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 2.2e-65 252.3 141 97.2
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 1.1e-64 250.0 136 100.0
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 6.2e-60 234.2 141 89.4
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 8.1e-60 233.8 139 90.6
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 5.3e-59 231.1 141 89.4
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 6.9e-59 230.7 139 89.2
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 1.3e-54 216.5 142 84.5
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 2.9e-49 198.7 139 78.4
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 2.6e-42 175.6 138 66.7
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 3.4e-42 175.3 138 65.2
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 5.8e-42 174.5 139 66.9
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.0e-41 173.7 138 67.4
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 2.9e-41 172.2 141 65.2
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 2.9e-41 172.2 137 64.2
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.8e-41 171.8 138 63.0
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 6.5e-41 171.0 138 64.5
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 8.4e-41 170.6 138 66.7
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 8.4e-41 170.6 138 63.0
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 8.4e-41 170.6 138 63.8
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 1.1e-40 170.2 139 61.9
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 1.4e-40 169.9 138 63.0
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.9e-40 169.5 138 65.2
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 1.9e-40 169.5 138 65.9
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 1.9e-40 169.5 141 64.5
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 1.9e-40 169.5 141 63.1
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 3.2e-40 168.7 141 63.8
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 4.2e-40 168.3 138 65.2
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 5.5e-40 167.9 138 63.8
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 7.1e-40 167.5 138 62.3
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 9.3e-40 167.2 138 61.6
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.6e-39 166.4 141 61.0
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 2.1e-39 166.0 138 63.8
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 3.5e-39 165.2 138 63.0
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 6.0e-39 164.5 135 65.9
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 6.0e-39 164.5 138 60.9
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 7.9e-39 164.1 141 58.2
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 7.9e-39 164.1 141 61.7
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.3e-38 163.3 138 58.7
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.8e-38 162.9 138 63.0
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 2.3e-38 162.5 139 61.9
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.3e-38 162.5 138 63.0
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.3e-38 162.5 138 59.4
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 2.3e-38 162.5 138 63.8
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 3.9e-38 161.8 141 60.3
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 3.9e-38 161.8 138 61.6
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.9e-38 161.8 139 63.3
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 5.1e-38 161.4 137 62.0
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 1.1e-37 160.2 138 60.9
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.3e-37 158.7 138 60.9
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 4.3e-37 158.3 138 60.1
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 5.7e-37 157.9 138 60.9
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 1.6e-36 156.4 137 61.3
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 2.8e-36 155.6 128 66.4
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 2.8e-36 155.6 138 57.2
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 4.8e-36 154.8 138 60.1
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 4.8e-36 154.8 141 56.0
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 4.8e-36 154.8 141 59.6
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 8.2e-36 154.1 139 57.6
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 8.2e-36 154.1 134 61.2
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 2.4e-35 152.5 141 58.9
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.4e-35 152.5 134 58.2
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 6.9e-35 151.0 139 58.3
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 1.2e-34 150.2 138 57.2
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 2.6e-34 149.1 129 65.1
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.0e-33 147.1 138 55.8
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.2e-33 146.0 138 55.8
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 2.2e-33 146.0 138 55.8
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.2e-33 146.0 129 63.6
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.8e-33 145.2 133 57.9
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 3.8e-33 145.2 144 54.9
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 6.5e-33 144.4 138 55.1
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.4e-32 143.3 111 69.4
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 3.2e-32 142.1 138 50.0
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 4.2e-32 141.7 138 50.7
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 4.2e-32 141.7 127 59.8
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 2.1e-31 139.4 141 52.5
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 7.9e-31 137.5 138 53.6
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 3.3e-29 132.1 129 55.8
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 1.3e-28 130.2 112 58.0
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 2.2e-28 129.4 138 55.8
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.5e-26 123.2 105 61.9
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 7.9e-23 110.9 140 42.1
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 1.4e-22 110.2 97 58.8
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.4e-22 110.2 142 42.3
BolC4t25036H Brassica oleracea HOM05D005711 ORTHO05D040726 3.0e-22 109.0 125 60.8
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 2.0e-18 96.3 142 42.3
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 2.2e-17 92.8 132 39.4
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 5.0e-17 91.7 80 58.8
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 7.2e-16 87.8 78 59.0
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 1.4e-14 83.6 137 34.3
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 1.4e-11 73.6 60 63.3
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 5.9e-10 68.2 71 47.9
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 1.0e-09 67.4 55 61.8
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.0e-09 67.4 55 61.8


User provided reference genes

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