Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40344 Brassica carinata HOM05D000031 ORTHO05D094991 2.7e-22 107.8 56 100.0
C08p33330 Brassica napus HOM05D000031 ORTHO05D001033 2.7e-22 107.8 56 100.0
BolC8t50934H Brassica oleracea HOM05D000031 ORTHO05D001033 2.7e-22 107.8 56 100.0
BcaB03g14606 Brassica carinata HOM05D000031 ORTHO05D001033 4.9e-16 87.0 56 80.4
Thhalv10000211m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.2e-14 82.4 51 78.4
AT3G57730 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 7.8e-14 79.7 51 78.4
A04p06020 Brassica napus HOM05D000031 ORTHO05D001033 1.0e-13 79.3 50 82.0
BraA04t16306Z Brassica rapa HOM05D000031 ORTHO05D001033 1.0e-13 79.3 50 82.0
Carub.0005s2457 Capsella rubella HOM05D000031 ORTHO05D001033 1.3e-13 79.0 46 84.8
CARHR167840 Cardamine hirsuta HOM05D000031 ORTHO05D001033 3.0e-13 77.8 48 79.2
AL5G39360 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 8.6e-13 76.3 46 82.6
Thhalv10006071m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 8.6e-13 76.3 51 74.5
Carub.0005s2455 Capsella rubella HOM05D000031 ORTHO05D001033 1.1e-12 75.9 48 77.1
AL5G39330 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 1.9e-12 75.1 48 79.2
AT3G57710 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 3.3e-12 74.3 47 76.6
AL5G39350 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 4.3e-12 73.9 51 76.5
CARHR167990 Cardamine hirsuta HOM05D000031 ORTHO05D001033 5.6e-12 73.6 46 78.3
CARHR167980 Cardamine hirsuta HOM05D000031 ORTHO05D001033 9.5e-12 72.8 45 77.8
CARHR167960 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.2e-11 72.4 46 78.3
Aa31sc1360G10 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.6e-11 72.0 54 63.0
CARHR167860 Cardamine hirsuta HOM05D000031 ORTHO05D001033 3.6e-11 70.9 49 73.5
Aa31sc1360G30 Aethionema arabicum HOM05D000031 ORTHO05D001033 4.7e-11 70.5 54 63.0
BcaB08g36026 Brassica carinata HOM05D000031 ORTHO05D001033 4.7e-11 70.5 48 70.8
BraA04t16016Z Brassica rapa HOM05D000031 ORTHO05D001033 3.1e-10 67.8 54 59.3
AT3G57720 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 4.0e-10 67.4 46 69.6
Aa31LG10G12480 Aethionema arabicum HOM05D000031 ORTHO05D001033 6.8e-10 66.6 48 62.5
Sp3g24520 Schrenkiella parvula HOM05D000031 ORTHO05D001033 6.8e-10 66.6 48 66.7
C09p48660 Brassica napus HOM05D000031 ORTHO05D001033 8.9e-10 66.2 48 64.6
A04p07330 Brassica napus HOM05D000031 ORTHO05D001033 2.0e-09 65.1 47 68.1
CARHR167970 Cardamine hirsuta HOM05D000031 ORTHO05D001033 2.6e-09 64.7 42 78.6
AL5G39340 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 4.4e-09 63.9 45 68.9
Carub.0005s2456 Capsella rubella HOM05D000031 ORTHO05D001033 4.4e-09 63.9 46 65.2
Sp6g08210 Schrenkiella parvula HOM05D000031 ORTHO05D001033 4.4e-09 63.9 49 71.4
BcaC04g20026 Brassica carinata HOM05D000031 ORTHO05D001033 5.8e-09 63.5 48 62.5
BolC4t25020H Brassica oleracea HOM05D000031 ORTHO05D001033 1.3e-08 62.4 47 63.8
BcaB01g02797 Brassica carinata HOM05D000031 ORTHO05D001033 1.7e-08 62.0 52 65.4
A03p28490 Brassica napus HOM05D000031 ORTHO05D001033 6.4e-08 60.1 52 65.4
BraA04t16428Z Brassica rapa HOM05D000031 ORTHO05D001033 6.4e-08 60.1 47 63.8
THA.LOC104799174 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 6.4e-08 60.1 48 60.4
A09p50610 Brassica napus HOM05D000031 ORTHO05D001033 8.3e-08 59.7 42 69.0
BcaC01g04726 Brassica carinata HOM05D000031 ORTHO05D001033 1.4e-07 58.9 52 63.5
BcaC02g09287 Brassica carinata HOM05D000031 ORTHO05D001033 1.4e-07 58.9 47 63.8
C03p34430 Brassica napus HOM05D000031 ORTHO05D001033 1.4e-07 58.9 52 63.5
C04p40940 Brassica napus HOM05D000031 ORTHO05D001033 1.4e-07 58.9 47 63.8
BolC3t15752H Brassica oleracea HOM05D000031 ORTHO05D001033 1.4e-07 58.9 52 63.5
BolC4t25677H Brassica oleracea HOM05D000031 ORTHO05D001033 1.4e-07 58.9 47 63.8
Aa31LG10G12460 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.9e-07 58.5 37 75.7
THA.LOC104799334 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 4.1e-07 57.4 48 54.2
AL4G17380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 5.4e-07 57.0 46 56.5
Thhalv10006070m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.6e-06 55.5 49 61.2
THA.LOC104799098 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 2.7e-06 54.7 48 56.2
THA.LOC104802335 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 2.7e-06 54.7 47 53.2


User provided reference genes

Program Settings