Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40310 Brassica carinata HOM05D013356 ORTHO05D013234 7.9e-126 453.8 224 100.0
BcaC07g40239 Brassica carinata HOM05D013356 ORTHO05D013234 3.8e-112 408.3 202 99.5
BcaB03g16862 Brassica carinata HOM05D013356 ORTHO05D013234 9.8e-76 287.3 145 96.6
BraA03t10128Z Brassica rapa HOM05D011623 ORTHO05D013234 1.5e-63 246.9 180 70.0
C02p00610 Brassica napus HOM05D011623 ORTHO05D013234 2.6e-60 236.1 180 67.2
BcaB04g17563 Brassica carinata HOM05D037002 ORTHO05D032729 3.0e-56 222.6 200 58.0
A03p45770 Brassica napus HOM05D011623 ORTHO05D013234 9.9e-52 207.6 193 60.1
BcaNung06303 Brassica carinata HOM05D013356 ORTHO05D013234 2.6e-44 183.0 107 83.2
BcaB03g15469 Brassica carinata HOM05D011623 ORTHO05D013234 4.0e-37 159.1 143 57.3
BcaC08g43555 Brassica carinata HOM05D011623 ORTHO05D027331 5.8e-36 155.2 155 55.5
A01p23070 Brassica napus HOM05D011623 ORTHO05D027331 2.7e-33 146.4 142 53.5
BcaC09g49673 Brassica carinata HOM05D011623 ORTHO05D013234 6.7e-32 141.7 125 64.8
C08p28580 Brassica napus HOM05D011623 ORTHO05D013234 3.7e-30 136.0 138 51.4
A01p09210 Brassica napus HOM05D011623 ORTHO05D027331 1.9e-26 123.6 129 51.9
BcaB01g00527 Brassica carinata HOM05D013356 ORTHO05D013234 3.5e-25 119.4 63 98.4
BcaNung05392 Brassica carinata HOM05D013356 ORTHO05D013234 3.5e-25 119.4 63 98.4
BraA02t08130Z Brassica rapa HOM05D011623 ORTHO05D013234 3.9e-24 115.9 103 60.2
Sp2g05270 Schrenkiella parvula HOM05D011623 ORTHO05D013234 1.6e-17 94.0 198 33.8
Carub.0008s1808 Capsella rubella HOM05D000930 ORTHO05D000748 2.9e-11 73.2 88 39.8
C07p04630 Brassica napus HOM05D013356 ORTHO05D102871 2.3e-08 63.5 75 45.3
BcaB03g16825 Brassica carinata HOM05D000834 ORTHO05D000909 3.9e-08 62.8 32 87.5
BolC1t04627H Brassica oleracea HOM05D011596 ORTHO05D000002 8.2e-06 55.1 45 55.6


User provided reference genes

Program Settings