Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 1.1e-144 516.5 247 100.0
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 2.7e-111 405.6 224 89.3
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 3.1e-107 392.1 208 92.8
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 1.7e-105 386.3 247 81.0
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 1.2e-98 363.6 225 77.3
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.1e-96 357.1 225 76.9
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 1.6e-95 353.2 222 77.0
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 8.8e-94 347.4 219 76.3
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.2e-93 347.1 230 74.8
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 3.4e-93 345.5 223 74.9
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 4.4e-93 345.1 229 71.6
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 5.7e-93 344.7 229 72.5
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 1.7e-92 343.2 247 68.4
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 3.7e-92 342.0 229 71.6
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 3.1e-91 339.0 226 75.2
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 7.0e-91 337.8 216 74.5
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 3.5e-90 335.5 247 67.2
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 2.0e-85 319.7 260 62.7
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 5.0e-81 305.1 257 60.3
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 3.0e-78 295.8 226 66.4
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 1.9e-72 276.6 227 59.0
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 3.3e-72 275.8 225 59.6
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 5.6e-72 275.0 224 59.4
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 7.3e-72 274.6 220 59.5
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 7.3e-72 274.6 225 58.7
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 9.5e-72 274.2 227 60.8
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 4.7e-71 271.9 226 58.8
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 1.0e-70 270.8 226 58.0
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 1.0e-70 270.8 224 59.4
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 2.3e-70 269.6 225 58.7
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 2.3e-70 269.6 225 58.7
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 2.3e-70 269.6 227 58.6
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 2.3e-70 269.6 225 56.0
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 4.0e-70 268.9 224 58.0
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 8.9e-70 267.7 227 58.1
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 8.9e-70 267.7 218 59.2
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 3.4e-69 265.8 225 57.3
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 3.4e-69 265.8 219 58.0
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 3.4e-69 265.8 226 56.2
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 5.8e-69 265.0 227 57.3
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 5.8e-69 265.0 219 57.5
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 9.8e-69 264.2 223 57.0
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 2.2e-68 263.1 229 55.9
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 2.2e-68 263.1 222 59.0
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 4.9e-68 261.9 224 57.1
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 4.9e-68 261.9 228 57.0
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 4.9e-68 261.9 227 57.7
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 6.4e-68 261.5 210 59.0
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 6.4e-68 261.5 210 59.0
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 1.4e-67 260.4 225 56.0
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.4e-67 260.4 226 54.9
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 3.2e-67 259.2 222 56.3
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 5.4e-67 258.5 226 55.3
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 9.2e-67 257.7 142 83.8
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 9.2e-67 257.7 222 55.0
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 9.2e-67 257.7 221 57.0
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 1.6e-66 256.9 221 58.4
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 2.7e-66 256.1 209 58.4
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.7e-66 256.1 209 58.4
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 3.5e-66 255.8 236 54.2
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 3.5e-66 255.8 221 56.1
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 4.6e-66 255.4 223 56.5
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.6e-66 255.4 209 58.4
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 4.6e-66 255.4 242 51.7
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 4.6e-66 255.4 228 55.7
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 6.0e-66 255.0 243 52.7
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 6.0e-66 255.0 252 52.0
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 7.8e-66 254.6 242 50.4
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 7.8e-66 254.6 242 52.9
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 1.0e-65 254.2 221 59.3
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 2.3e-65 253.1 226 52.7
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 2.3e-65 253.1 223 55.6
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 3.0e-65 252.7 230 55.2
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 6.6e-65 251.5 225 53.8
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 8.6e-65 251.1 228 54.4
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.5e-64 250.4 202 59.4
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 1.9e-64 250.0 230 53.0
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.6e-63 246.9 200 59.0
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 2.8e-63 246.1 211 56.4
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 4.7e-63 245.4 217 53.5
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 1.1e-62 244.2 225 52.4
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.4e-62 243.8 253 49.8
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 3.1e-62 242.7 229 52.8
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 5.2e-62 241.9 227 51.5
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 5.2e-62 241.9 213 56.3
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 3.4e-61 239.2 233 58.4
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 3.4e-61 239.2 247 51.8
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 3.7e-60 235.7 226 52.7
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 4.1e-59 232.3 207 54.6
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 4.1e-59 232.3 205 56.6
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.6e-58 230.3 206 53.9
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.7e-58 229.6 204 53.4
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 2.7e-58 229.6 205 55.1
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 1.3e-57 227.3 225 48.9
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 3.9e-57 225.7 218 51.4
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 8.6e-57 224.6 204 52.0
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 1.5e-56 223.8 280 43.6
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 9.5e-56 221.1 222 48.6
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 6.2e-55 218.4 217 53.0
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 1.4e-54 217.2 229 47.6
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 6.8e-54 214.9 204 53.4
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 6.8e-54 214.9 223 49.3
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 2.6e-53 213.0 209 50.2
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 5.8e-53 211.8 196 52.6
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 7.6e-53 211.5 187 56.7
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 7.1e-51 204.9 156 59.0
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 9.6e-48 194.5 190 48.4
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 2.6e-45 186.4 143 57.3
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.4e-45 186.0 160 55.0
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 7.6e-45 184.9 219 46.1
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 5.4e-43 178.7 217 44.2
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 6.6e-41 171.8 228 41.7
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 5.6e-40 168.7 230 40.4
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 1.4e-38 164.1 223 40.4
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 1.2e-37 161.0 151 51.0
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 3.8e-36 156.0 130 57.7
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 1.4e-35 154.1 146 50.0
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 2.4e-35 153.3 128 57.8
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 2.7e-34 149.8 133 52.6
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 3.5e-34 149.4 160 46.2
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 6.6e-33 145.2 146 50.0
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 1.1e-32 144.4 207 39.1
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 9.6e-32 141.4 200 37.5
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 3.1e-30 136.3 111 58.6
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 2.2e-28 130.2 218 35.8
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 3.8e-28 129.4 119 55.5
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 3.0e-25 119.8 149 45.0
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 3.3e-24 116.3 96 58.3
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 2.1e-23 113.6 129 48.1
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.1e-22 111.3 115 49.6
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 4.0e-22 109.4 97 53.6
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 1.5e-21 107.5 120 46.7
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 2.0e-21 107.1 78 61.5
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 1.0e-20 104.8 96 54.2
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.0e-20 104.8 92 54.3
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 1.0e-20 104.8 356 25.3
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.3e-20 104.4 92 54.3
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.7e-20 104.0 92 54.3
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 1.7e-20 104.0 226 27.9
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.2e-18 97.8 64 60.9
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.6e-18 97.4 64 64.1
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 1.6e-18 97.4 98 49.0
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.3e-17 94.4 64 60.9
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 2.3e-17 93.6 65 69.2
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 5.7e-16 89.0 259 26.6
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 9.6e-16 88.2 76 59.2
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.3e-15 87.8 71 57.7
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 8.2e-15 85.1 86 47.7
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.1e-14 84.7 221 30.8
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-11 74.7 91 42.9
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.3e-09 67.8 57 52.6
SalBow1G6765 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.3e-09 67.8 64 51.6
SalBow1G4445 Salvia bowleyana HOM05D025598 ORTHO05D005315 2.3e-09 67.0 51 56.9
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 6.7e-09 65.5 87 41.4
SHI05337 Sapria himalayana HOM05D004561 ORTHO05D005315 9.7e-08 61.6 42 59.5
Ca_17309_v3 Cicer arietinum L. HOM05D002967 ORTHO05D003281 1.3e-07 61.2 61 44.3
RcHm_v2.0_Chr7g0204241 Rosa chinensis HOM05D004561 ORTHO05D005315 4.8e-07 59.3 44 59.1
RcHm_v2.0_Chr7g0204201 Rosa chinensis HOM05D004561 ORTHO05D005315 6.9e-06 55.5 35 68.6


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