Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40252 Brassica carinata HOM05D000051 ORTHO05D000015 3.6e-48 194.5 93 100.0
BolC8t50985H Brassica oleracea HOM05D000051 ORTHO05D000015 1.7e-42 175.6 85 97.6
C08p33870 Brassica napus HOM05D000115 ORTHO05D000015 1.1e-41 172.9 85 96.5
C07p40860 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-35 152.1 85 84.7
BcaNung02455 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-34 149.8 85 84.7
BolC7t44611H Brassica oleracea HOM05D000051 ORTHO05D000015 1.0e-34 149.8 85 84.7
A09p51050 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-31 138.3 86 80.2
BraA09t40551Z Brassica rapa HOM05D000051 ORTHO05D000015 3.1e-31 138.3 86 80.2
C08p35960 Brassica napus HOM05D000051 ORTHO05D000015 9.5e-25 116.7 85 68.2
BolC8t51179H Brassica oleracea HOM05D000051 ORTHO05D000015 9.5e-25 116.7 85 68.2
A09p53190 Brassica napus HOM05D000051 ORTHO05D000015 8.1e-24 113.6 85 65.9
BraA09t40744Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-23 113.2 85 65.9
CARHR171110 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-19 99.4 79 63.3
AT4G26340 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.2e-13 79.0 85 51.8
AL7G26600 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.9e-13 77.8 85 50.6
Carub.0007s1460 Capsella rubella HOM05D000051 ORTHO05D000015 8.4e-13 77.0 84 50.0
Thhalv10027384m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-12 76.6 90 47.8
AL8G41770 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.8e-11 70.5 81 50.6
BcaC06g32756 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-10 67.0 86 45.3
BcaNung02427 Brassica carinata HOM05D000051 ORTHO05D000015 3.3e-09 65.1 85 43.5
Carub.0007s2519 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-08 62.0 81 46.9
Thhalv10011042m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.6e-08 61.6 82 39.0
BraA03t14733Z Brassica rapa HOM05D000051 ORTHO05D000015 8.1e-08 60.5 85 42.4
A03p56640 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-07 60.1 79 44.3
AL5G28550 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.1e-07 58.5 81 37.0
BolC7t45973H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-07 58.5 82 40.2
Thhalv10010427m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.5e-06 56.2 81 37.0
BraA04t17635Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-06 55.8 78 39.7
BcaC09g50692 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-06 55.5 86 41.9
BolC1t02149H Brassica oleracea HOM05D000051 ORTHO05D000015 2.6e-06 55.5 86 41.9
AL5G15910 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.4e-06 54.7 81 37.0
C07p54830 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-06 54.3 79 41.8
Thhalv10011064m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.8e-06 54.3 81 34.6
C01p22190 Brassica napus HOM05D000051 ORTHO05D000015 7.6e-06 53.9 86 41.9
Carub.0008s0938 Capsella rubella HOM05D000051 ORTHO05D000015 9.9e-06 53.5 84 36.9


User provided reference genes

Program Settings