Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40017 Brassica carinata HOM05D010911 ORTHO05D013233 3.5e-43 177.9 93 100.0
C08p32300 Brassica napus HOM05D010756 ORTHO05D000925 2.1e-40 168.7 93 95.7
BolC8t50844H Brassica oleracea HOM05D010756 ORTHO05D000925 2.1e-40 168.7 93 95.7
BcaC05g30415 Brassica carinata HOM05D010756 ORTHO05D023874 6.4e-37 157.1 91 91.2
BcaC08g44551 Brassica carinata HOM05D010756 ORTHO05D023874 2.3e-34 148.7 82 95.1
BcaC09g51604 Brassica carinata HOM05D010911 ORTHO05D013233 6.8e-15 84.0 67 67.2
C02p48850 Brassica napus HOM05D010911 ORTHO05D024084 2.6e-14 82.0 78 59.0
BolC1t01117H Brassica oleracea HOM05D012955 ORTHO05D013233 2.6e-14 82.0 67 64.2
C07p34530 Brassica napus HOM05D009883 ORTHO05D042457 3.4e-14 81.6 67 64.2
BolC7t43984H Brassica oleracea HOM05D009883 ORTHO05D042457 3.4e-14 81.6 67 64.2
C01p19620 Brassica napus HOM05D010911 ORTHO05D024084 4.4e-14 81.3 78 59.0
C01p11480 Brassica napus HOM05D012955 ORTHO05D013233 1.3e-13 79.7 67 62.7
BolC2t10979H Brassica oleracea HOM05D010911 ORTHO05D024084 1.3e-13 79.7 78 57.7
BcaB07g32252 Brassica carinata HOM05D009883 ORTHO05D000925 2.2e-13 79.0 86 51.2
BcaC08g44116 Brassica carinata HOM05D012955 ORTHO05D013233 2.2e-13 79.0 66 65.2
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 2.9e-13 78.6 67 65.7
BcaC03g16984 Brassica carinata HOM05D010911 ORTHO05D024084 6.4e-13 77.4 78 56.4
BolC8t47090H Brassica oleracea HOM05D009883 ORTHO05D013233 2.1e-11 72.4 69 58.0
BcaNung01985 Brassica carinata HOM05D025747 ORTHO05D027206 4.6e-11 71.2 62 67.7
C07p63750 Brassica napus HOM05D025747 ORTHO05D027206 4.6e-11 71.2 62 67.7
BolC2t07161H Brassica oleracea HOM05D010911 ORTHO05D041405 4.6e-11 71.2 74 58.1
C05p20040 Brassica napus HOM05D009883 ORTHO05D013233 6.0e-11 70.9 56 75.0
C02p10910 Brassica napus HOM05D010911 ORTHO05D041405 1.3e-10 69.7 74 56.8
C02p57290 Brassica napus HOM05D025747 ORTHO05D027206 3.9e-10 68.2 55 70.9
A05p29390 Brassica napus HOM05D009883 ORTHO05D014964 5.1e-10 67.8 51 74.5
C01p16740 Brassica napus HOM05D009883 ORTHO05D014964 5.1e-10 67.8 68 63.2
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 5.1e-10 67.8 74 50.0
BcaC03g13094 Brassica carinata HOM05D012955 ORTHO05D013233 6.6e-10 67.4 53 67.9
BolC2t06001H Brassica oleracea HOM05D012955 ORTHO05D013233 6.6e-10 67.4 53 67.9
C07p55460 Brassica napus HOM05D009883 ORTHO05D014964 8.7e-10 67.0 68 61.8
BcaB02g07877 Brassica carinata HOM05D009883 ORTHO05D014964 1.1e-09 66.6 68 55.9
C09p12520 Brassica napus HOM05D031612 ORTHO05D041637 1.1e-09 66.6 88 51.1
BcaB07g32459 Brassica carinata HOM05D009883 ORTHO05D014964 1.9e-09 65.9 61 60.7
BcaNung03341 Brassica carinata HOM05D010911 ORTHO05D032845 1.9e-09 65.9 51 66.7
C03p48840 Brassica napus HOM05D025747 ORTHO05D027206 1.9e-09 65.9 55 69.1
C07p23330 Brassica napus HOM05D010911 ORTHO05D032845 1.9e-09 65.9 51 66.7
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-09 65.9 74 50.0
BcaB06g26236 Brassica carinata HOM05D010911 ORTHO05D013233 2.5e-09 65.5 57 64.9
BolC3t16808H Brassica oleracea HOM05D009883 ORTHO05D014964 5.6e-09 64.3 63 54.0
BolC7t42866H Brassica oleracea HOM05D010911 ORTHO05D032845 5.6e-09 64.3 50 66.0
C02p20340 Brassica napus HOM05D010911 ORTHO05D000925 1.6e-08 62.8 63 54.0
C05p06360 Brassica napus HOM05D009883 ORTHO05D024588 2.1e-08 62.4 62 64.5
C08p33880 Brassica napus HOM05D009883 ORTHO05D024588 4.8e-08 61.2 70 57.1
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 4.8e-08 61.2 66 48.5
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 4.8e-08 61.2 63 55.6
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 6.2e-08 60.8 75 46.7
C08p16430 Brassica napus HOM05D009883 ORTHO05D024588 6.2e-08 60.8 49 71.4
BolC5t29233H Brassica oleracea HOM05D009883 ORTHO05D024588 6.2e-08 60.8 49 71.4
BolC6t35891H Brassica oleracea HOM05D010911 ORTHO05D000925 6.2e-08 60.8 75 46.7
BolC4t27575H Brassica oleracea HOM05D009883 ORTHO05D014964 8.1e-08 60.5 51 66.7
C03p45410 Brassica napus HOM05D009883 ORTHO05D014964 1.4e-07 59.7 54 59.3
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 1.4e-07 59.7 63 52.4
BraA03t13396Z Brassica rapa HOM05D009883 ORTHO05D024588 1.8e-07 59.3 49 69.4
BcaC09g51105 Brassica carinata HOM05D009883 ORTHO05D014964 3.1e-07 58.5 58 62.1
BolC1t03157H Brassica oleracea HOM05D010756 ORTHO05D000925 5.3e-07 57.8 65 53.8
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 6.9e-07 57.4 60 51.7
BolC7t45220H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-06 56.2 64 48.4
BolC8t49091H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-06 56.2 60 50.0
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 2.6e-06 55.5 65 49.2


User provided reference genes

Program Settings