Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39978 Brassica carinata HOM05D000477 ORTHO05D000338 9.1e-56 219.9 106 100.0
C08p31940 Brassica napus HOM05D000477 ORTHO05D000338 2.9e-46 188.3 90 100.0
BolC8t50811H Brassica oleracea HOM05D000477 ORTHO05D000338 1.6e-44 182.6 90 97.8
A09p49550 Brassica napus HOM05D000477 ORTHO05D000338 4.9e-41 171.0 90 93.3
BraA09t40408Z Brassica rapa HOM05D000477 ORTHO05D000338 4.9e-41 171.0 90 93.3
Thhalv10005887m.g Eutrema salsugineum HOM05D000477 ORTHO05D000338 2.2e-25 119.0 95 66.3
CARHR166840 Cardamine hirsuta HOM05D000477 ORTHO05D000338 4.7e-20 101.3 100 59.0
BraA04t16086Z Brassica rapa HOM05D000477 ORTHO05D000338 5.2e-19 97.8 95 56.8
C06p23740 Brassica napus HOM05D000477 ORTHO05D000338 1.2e-18 96.7 98 56.1
AL5G38070 Arabidopsis lyrata HOM05D000477 ORTHO05D000338 7.5e-18 94.0 98 54.1
BcaC02g09862 Brassica carinata HOM05D000477 ORTHO05D000338 9.8e-18 93.6 97 52.6
C04p35810 Brassica napus HOM05D000477 ORTHO05D000338 9.8e-18 93.6 97 52.6
BolC4t25219H Brassica oleracea HOM05D000477 ORTHO05D000338 9.8e-18 93.6 97 52.6
Sp5g05860 Schrenkiella parvula HOM05D000477 ORTHO05D000338 3.7e-17 91.7 99 56.6
A04p03490 Brassica napus HOM05D000477 ORTHO05D000338 4.9e-17 91.3 96 53.1
BcaB02g07642 Brassica carinata HOM05D000477 ORTHO05D000338 8.3e-17 90.5 95 54.7
AT3G56700 Arabidopsis thaliana HOM05D000477 ORTHO05D000338 1.1e-16 90.1 99 52.5
BcaC08g44802 Brassica carinata HOM05D000477 ORTHO05D000338 1.1e-16 90.1 80 57.5
A09p49530 Brassica napus HOM05D000477 ORTHO05D000338 3.2e-16 88.6 102 55.9
BraA09t40407Z Brassica rapa HOM05D000477 ORTHO05D000338 3.2e-16 88.6 102 55.9
BcaC07g39974 Brassica carinata HOM05D000477 ORTHO05D000338 4.1e-16 88.2 102 54.9
BcaC07g39975 Brassica carinata HOM05D000477 ORTHO05D000338 4.1e-16 88.2 102 54.9
BolC8t50810H Brassica oleracea HOM05D000477 ORTHO05D000338 7.1e-16 87.4 83 56.6
A07p23150 Brassica napus HOM05D000477 ORTHO05D000338 4.6e-15 84.7 102 52.0
C08p31930 Brassica napus HOM05D000477 ORTHO05D000338 1.0e-14 83.6 102 52.0
BraA07t29966Z Brassica rapa HOM05D000477 ORTHO05D000338 1.0e-14 83.6 96 53.1
C04p35780 Brassica napus HOM05D000477 ORTHO05D000338 1.3e-14 83.2 95 52.6
BolC6t37542H Brassica oleracea HOM05D000477 ORTHO05D000338 1.3e-14 83.2 72 59.7
Carub.0005s2344 Capsella rubella HOM05D000477 ORTHO05D000338 1.7e-14 82.8 83 54.2
A07p23040 Brassica napus HOM05D000477 ORTHO05D000338 3.0e-14 82.0 96 52.1
BcaC08g44800 Brassica carinata HOM05D000477 ORTHO05D000338 5.1e-14 81.3 96 53.1
BolC6t37540H Brassica oleracea HOM05D000477 ORTHO05D000338 5.1e-14 81.3 96 53.1
BcaB02g08355 Brassica carinata HOM05D000477 ORTHO05D000338 6.6e-14 80.9 96 51.0
BraA07t29975Z Brassica rapa HOM05D000477 ORTHO05D000338 6.6e-14 80.9 96 52.1
BcaB02g08353 Brassica carinata HOM05D000477 ORTHO05D000338 1.5e-13 79.7 95 49.5
C06p23700 Brassica napus HOM05D000477 ORTHO05D000338 2.5e-13 79.0 96 52.1
BcaB02g08354 Brassica carinata HOM05D000477 ORTHO05D000338 9.5e-13 77.0 94 47.9
BcaB02g07641 Brassica carinata HOM05D000477 ORTHO05D000338 5.2e-11 71.2 100 51.0
CARHR159440 Cardamine hirsuta HOM05D000477 ORTHO05D000338 1.3e-09 66.6 51 66.7
BcaC07g40125 Brassica carinata HOM05D000477 ORTHO05D000338 1.2e-07 60.1 40 77.5
BraA04t16088Z Brassica rapa HOM05D000477 ORTHO05D000338 3.9e-06 55.1 94 38.3


User provided reference genes

Program Settings