Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 2.7e-126 455.3 225 100.0
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 2.7e-126 455.3 225 100.0
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 1.2e-116 423.3 226 94.7
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 8.6e-104 380.6 215 89.8
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 8.6e-104 380.6 215 89.8
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 5.2e-93 344.7 215 85.6
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 7.5e-92 340.9 230 77.8
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 6.4e-91 337.8 236 76.7
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 1.6e-89 333.2 223 79.4
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 6.0e-89 331.3 223 79.4
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 6.0e-89 331.3 223 79.4
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.0e-88 330.5 238 74.8
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 3.0e-88 328.9 228 77.2
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 3.6e-86 322.0 225 78.2
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 4.7e-86 321.6 225 78.2
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 8.1e-86 320.9 228 75.4
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 1.8e-85 319.7 235 73.6
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 9.2e-82 307.4 225 76.0
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 8.9e-69 264.2 241 61.8
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 5.8e-68 261.5 245 62.4
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.9e-64 248.8 245 59.6
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 7.6e-60 234.6 235 59.1
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 6.2e-46 188.3 184 53.3
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 7.6e-44 181.4 192 53.6
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 7.6e-44 181.4 192 53.6
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 8.4e-43 177.9 199 51.8
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 8.4e-43 177.9 210 47.1
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 7.1e-42 174.9 176 53.4
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 7.1e-42 174.9 240 45.0
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 9.3e-42 174.5 175 54.9
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 9.3e-42 174.5 198 51.0
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 1.2e-41 174.1 202 50.0
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 1.6e-41 173.7 202 48.5
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.6e-41 173.7 202 48.5
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 2.1e-41 173.3 186 52.7
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.5e-41 172.6 222 48.2
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.5e-41 172.6 222 48.2
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 4.6e-41 172.2 207 49.3
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 4.6e-41 172.2 194 50.5
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 4.6e-41 172.2 194 50.5
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 4.6e-41 172.2 210 47.1
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 6.0e-41 171.8 201 50.2
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 6.0e-41 171.8 237 43.9
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.3e-40 170.6 204 47.5
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.3e-40 170.6 213 47.4
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 1.3e-40 170.6 174 46.6
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 2.3e-40 169.9 190 49.5
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 3.9e-40 169.1 245 43.3
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 3.9e-40 169.1 151 54.3
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 3.9e-40 169.1 161 55.3
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 3.9e-40 169.1 199 47.7
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 3.9e-40 169.1 197 47.7
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 1.1e-39 167.5 231 44.6
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 1.5e-39 167.2 207 48.3
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 1.5e-39 167.2 171 50.3
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 3.3e-39 166.0 200 45.0
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 4.3e-39 165.6 216 44.4
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 4.3e-39 165.6 150 55.3
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 4.3e-39 165.6 178 50.6
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 5.7e-39 165.2 180 45.6
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 7.4e-39 164.9 152 52.6
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 7.4e-39 164.9 153 51.6
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 3.7e-38 162.5 155 50.3
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 4.8e-38 162.2 150 54.7
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 1.1e-37 161.0 177 49.2
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 1.4e-37 160.6 175 49.7
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 1.4e-37 160.6 177 42.9
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.4e-37 160.6 204 48.5
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 3.1e-37 159.5 195 46.7
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 1.2e-36 157.5 180 49.4
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 2.0e-36 156.8 232 42.7
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 2.0e-36 156.8 192 41.1
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 2.6e-36 156.4 181 44.8
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 2.6e-36 156.4 176 47.2
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 4.5e-36 155.6 163 50.3
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 5.9e-36 155.2 180 46.1
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 7.6e-36 154.8 161 49.1
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 7.6e-36 154.8 190 43.2
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 7.6e-36 154.8 180 46.1
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 1.7e-35 153.7 178 48.3
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 1.7e-35 153.7 176 42.6
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.2e-35 153.3 161 50.9
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 2.2e-35 153.3 184 46.2
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.8e-35 152.5 161 50.3
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 6.5e-35 151.8 244 40.6
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 8.4e-35 151.4 242 40.5
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 8.4e-35 151.4 183 45.9
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.1e-34 151.0 161 50.3
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 4.2e-34 149.1 191 47.1
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 4.2e-34 149.1 228 42.5
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 4.2e-34 149.1 150 49.3
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 5.5e-34 148.7 187 44.9
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 7.2e-34 148.3 151 46.4
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 1.2e-33 147.5 158 44.9
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.6e-33 147.1 152 50.0
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 2.7e-33 146.4 155 49.7
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 3.5e-33 146.0 227 41.0
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 4.6e-33 145.6 145 52.4
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 1.8e-32 143.7 150 48.7
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.8e-32 143.7 225 38.2
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 3.9e-32 142.5 206 40.8
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 3.9e-32 142.5 173 43.4
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.3e-31 139.0 185 44.3
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 5.7e-31 138.7 185 44.3
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 9.7e-31 137.9 197 38.6
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 3.7e-30 136.0 152 48.7
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.4e-29 134.0 239 38.1
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.8e-29 133.7 150 46.7
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 5.3e-29 132.1 238 38.2
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 1.5e-28 130.6 153 47.7
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 4.5e-28 129.0 221 36.2
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 5.9e-28 128.6 155 45.2
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 7.7e-28 128.3 188 39.9
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 7.7e-28 128.3 185 39.5
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 1.0e-27 127.9 172 41.9
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 2.9e-27 126.3 190 37.9
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 5.0e-27 125.6 190 39.5
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 6.5e-27 125.2 206 36.9
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 6.5e-27 125.2 166 44.0
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 8.5e-27 124.8 154 46.8
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.1e-26 124.4 164 44.5
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 2.5e-26 123.2 172 40.7
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 5.5e-26 122.1 158 42.4
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 7.2e-26 121.7 150 46.7
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 6.1e-25 118.6 175 38.9
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 7.9e-25 118.2 161 42.2
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 6.7e-24 115.2 233 34.3
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 8.8e-24 114.8 152 42.1
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 1.5e-23 114.0 177 40.7
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 2.5e-23 113.2 206 40.3
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 3.3e-23 112.8 117 49.6
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 4.3e-23 112.5 154 40.9
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 4.3e-23 112.5 154 44.2
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 1.7e-22 110.5 154 38.3
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 2.2e-22 110.2 165 41.2
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 2.8e-22 109.8 162 40.1
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 3.7e-22 109.4 153 41.8
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 1.1e-21 107.8 177 35.6
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 1.1e-21 107.8 177 35.6
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.1e-21 107.8 132 46.2
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 1.8e-21 107.1 171 36.8
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.8e-21 107.1 130 46.2
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.4e-21 106.7 132 45.5
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 2.6e-20 103.2 171 39.2
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 5.9e-20 102.1 149 36.9
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 1.3e-19 100.9 162 40.1
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 2.2e-19 100.1 247 30.0
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 3.0e-16 89.7 178 34.3
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.9e-16 89.4 141 35.5
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 2.0e-15 87.0 181 34.3
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 4.4e-15 85.9 151 35.8
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 2.2e-14 83.6 148 37.8
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 8.2e-14 81.6 81 46.9
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.4e-13 80.9 64 60.9
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 1.8e-13 80.5 111 40.5
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 3.1e-13 79.7 148 33.1
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 3.1e-13 79.7 161 32.3
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.6e-12 77.4 199 31.2
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 2.9e-11 73.2 120 33.3
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 3.8e-11 72.8 168 29.8
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 2.5e-10 70.1 76 52.6
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 6.7e-08 62.0 83 41.0
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 1.1e-07 61.2 88 39.8
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 1.5e-07 60.8 79 39.2
CBR_g24287 Chara braunii HOM05D004173 ORTHO05D004885 7.5e-07 58.5 119 33.6
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 8.2e-06 55.1 155 29.7


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