Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 9.6e-95 350.1 175 100.0
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 9.6e-95 350.1 175 100.0
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 9.6e-95 350.1 175 100.0
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 4.0e-93 344.7 174 98.3
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 4.0e-93 344.7 174 98.3
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.1e-89 330.9 176 93.8
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 5.1e-88 327.8 175 94.9
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 5.1e-88 327.8 175 94.9
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 2.8e-86 322.0 175 90.3
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 2.8e-86 322.0 175 90.3
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 2.8e-86 322.0 175 90.3
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 6.3e-86 320.9 175 90.3
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 8.2e-86 320.5 175 89.7
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 1.0e-83 313.5 176 88.1
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 7.9e-81 303.9 177 84.7
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.4e-80 303.1 176 86.9
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 1.1e-79 300.1 177 85.3
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.2e-76 290.0 175 82.9
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 2.6e-76 288.9 181 81.8
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.5e-68 263.1 184 74.5
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 2.2e-62 242.7 178 69.7
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 1.5e-58 229.9 182 68.1
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 8.0e-57 224.2 176 66.5
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.3e-56 222.6 177 67.2
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.5e-55 219.9 175 65.7
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.0e-55 219.5 175 66.9
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 2.6e-55 219.2 177 65.5
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 5.7e-55 218.0 176 67.6
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 1.3e-54 216.9 179 64.8
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.7e-54 216.5 180 62.8
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 2.8e-54 215.7 176 64.8
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 4.8e-54 214.9 177 66.1
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 4.8e-54 214.9 179 65.4
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 6.3e-54 214.5 173 66.5
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 8.3e-54 214.2 179 65.4
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 1.1e-53 213.8 176 62.5
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.1e-53 213.8 179 65.4
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 2.4e-53 212.6 178 63.5
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 2.4e-53 212.6 175 65.7
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 3.1e-53 212.2 175 67.4
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.1e-53 212.2 175 64.6
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 4.1e-53 211.8 180 65.0
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 7.0e-53 211.1 173 65.3
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.2e-52 210.3 175 65.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.2e-52 210.3 179 63.1
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.6e-52 209.9 139 76.3
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 3.5e-52 208.8 180 63.3
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 4.5e-52 208.4 183 63.4
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 4.5e-52 208.4 178 62.9
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 4.5e-52 208.4 179 64.2
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 4.5e-52 208.4 182 62.6
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.7e-51 206.5 181 62.4
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.2e-51 206.1 180 60.6
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.9e-51 205.7 174 65.5
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 3.8e-51 205.3 179 64.2
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 5.0e-51 204.9 177 61.0
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 6.5e-51 204.5 188 61.7
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.1e-50 203.8 174 63.2
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.5e-50 203.4 137 73.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.5e-50 203.4 139 69.8
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.5e-50 203.4 136 75.0
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.9e-50 203.0 180 63.3
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.9e-50 203.0 179 60.3
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.9e-50 203.0 121 77.7
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.2e-50 202.2 136 74.3
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 3.2e-50 202.2 185 61.6
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 4.2e-50 201.8 176 60.8
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 4.2e-50 201.8 175 63.4
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 5.5e-50 201.4 131 74.0
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 5.5e-50 201.4 175 62.9
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 5.5e-50 201.4 174 61.5
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 9.4e-50 200.7 200 58.0
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 9.4e-50 200.7 182 63.7
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 9.4e-50 200.7 140 74.3
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.2e-49 200.3 180 58.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.2e-49 200.3 178 62.4
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.2e-49 200.3 178 62.4
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.6e-49 199.9 176 60.2
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 1.6e-49 199.9 119 80.7
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 2.7e-49 199.1 140 74.3
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 3.6e-49 198.7 138 68.8
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 3.6e-49 198.7 189 60.3
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 4.7e-49 198.4 139 70.5
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.8e-48 196.4 121 78.5
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 2.3e-48 196.1 143 66.4
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.0e-48 195.7 178 57.3
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 5.2e-48 194.9 182 58.2
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 8.8e-48 194.1 177 61.6
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 2.0e-47 193.0 140 70.7
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 2.6e-47 192.6 140 70.7
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 9.8e-47 190.7 139 70.5
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 1.3e-46 190.3 184 59.2
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 7.0e-45 184.5 115 77.4
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.0e-44 183.0 121 74.4
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 2.7e-44 182.6 191 53.9
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.5e-42 176.8 122 68.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 7.2e-42 174.5 131 63.4
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 1.0e-40 170.6 156 59.6
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 2.3e-40 169.5 184 54.3
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.4e-39 165.6 127 63.8
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 7.0e-37 157.9 187 50.8
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 5.0e-35 151.8 140 57.1
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.7e-33 145.2 103 68.0
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 6.2e-33 144.8 117 63.2
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.3e-27 126.3 123 54.5
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.2e-23 114.0 177 43.5
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.3e-22 110.5 58 86.2
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 4.9e-22 108.6 116 56.0
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 6.4e-22 108.2 68 73.5
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 8.3e-22 107.8 119 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 3.9e-19 99.0 77 68.8
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 8.9e-16 87.8 112 50.9
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 2.0e-07 60.1 66 51.5
Cre03.g144184 Chlamydomonas reinhardtii HOM05D007229 ORTHO05D009131 3.4e-07 59.3 65 49.2
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 3.4e-07 59.3 108 45.4


User provided reference genes

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