Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39943 Brassica carinata HOM05D010959 ORTHO05D001770 3.1e-105 385.2 203 100.0
A09p49240 Brassica napus HOM05D010959 ORTHO05D001770 1.0e-100 370.2 205 96.1
C08p31590 Brassica napus HOM05D010959 ORTHO05D001770 4.0e-100 368.2 204 96.6
BolC8t50780H Brassica oleracea HOM05D010959 ORTHO05D001770 4.0e-100 368.2 204 96.6
BraA09t40377Z Brassica rapa HOM05D010959 ORTHO05D001770 1.2e-99 366.7 205 95.1
BcaB01g00009 Brassica carinata HOM05D010959 ORTHO05D001770 1.2e-77 293.5 205 82.0
Thhalv10006243m.g Eutrema salsugineum HOM05D010959 ORTHO05D001770 1.1e-68 263.8 207 76.3
Sp5g06240 Schrenkiella parvula HOM05D010959 ORTHO05D001770 2.3e-68 262.7 198 76.8
CARHR166420 Cardamine hirsuta HOM05D010959 ORTHO05D001770 2.9e-50 202.6 202 60.9
BcaB02g07660 Brassica carinata HOM05D010959 ORTHO05D001770 1.1e-41 174.1 148 69.6
AT3G56260 Arabidopsis thaliana HOM05D010959 ORTHO05D001770 5.5e-41 171.8 195 55.4
BcaC08g44774 Brassica carinata HOM05D010959 ORTHO05D001770 2.7e-40 169.5 148 63.5
C06p23450 Brassica napus HOM05D010959 ORTHO05D001770 3.5e-40 169.1 147 63.9
Carub.0005s2304 Capsella rubella HOM05D010959 ORTHO05D001770 3.3e-38 162.5 215 51.2
BolC6t37519H Brassica oleracea HOM05D010959 ORTHO05D001770 7.4e-38 161.4 147 61.9
AL5G37580 Arabidopsis lyrata HOM05D010959 ORTHO05D001770 1.2e-35 154.1 191 53.9
A07p22870 Brassica napus HOM05D010959 ORTHO05D001770 7.6e-35 151.4 147 58.5
BraA07t29953Z Brassica rapa HOM05D010959 ORTHO05D001770 7.6e-35 151.4 147 58.5
THA.LOC104824354 Tarenaya hassleriana HOM05D002277 ORTHO05D001770 1.1e-20 104.4 203 44.8
C03p27010 Brassica napus HOM05D002277 ORTHO05D001770 1.7e-18 97.1 180 44.4
Sp4g22820 Schrenkiella parvula HOM05D002277 ORTHO05D001770 2.2e-18 96.7 187 44.9
BraA05t19171Z Brassica rapa HOM05D002277 ORTHO05D001770 3.8e-18 95.9 181 47.0
A05p01740 Brassica napus HOM05D002277 ORTHO05D001770 6.5e-18 95.1 181 46.4
C04p02010 Brassica napus HOM05D002277 ORTHO05D001770 8.5e-18 94.7 181 46.4
A03p22770 Brassica napus HOM05D002277 ORTHO05D001770 2.5e-17 93.2 180 43.9
BraA03t11501Z Brassica rapa HOM05D002277 ORTHO05D001770 2.5e-17 93.2 180 43.9
Aa31LG10G11170 Aethionema arabicum HOM05D010959 ORTHO05D001770 1.6e-16 90.5 209 40.2
BcaB01g03537 Brassica carinata HOM05D002277 ORTHO05D001770 2.1e-16 90.1 186 41.4
Aa31LG5G19050 Aethionema arabicum HOM05D002277 ORTHO05D001770 8.8e-15 84.7 187 40.1
CARHR135590 Cardamine hirsuta HOM05D002277 ORTHO05D001770 1.5e-14 84.0 186 38.7
BcaC02g12718 Brassica carinata HOM05D002277 ORTHO05D001770 4.3e-14 82.4 188 42.0
AL4G38320 Arabidopsis lyrata HOM05D002277 ORTHO05D001770 7.4e-14 81.6 207 38.2
AT2G40475 Arabidopsis thaliana HOM05D002277 ORTHO05D001770 1.4e-12 77.4 184 38.6
BcaC01g05398 Brassica carinata HOM05D002277 ORTHO05D001770 1.4e-12 77.4 181 40.3
Thhalv10017268m.g Eutrema salsugineum HOM05D002277 ORTHO05D001770 1.4e-12 77.4 208 37.5
BolC4t21852H Brassica oleracea HOM05D002277 ORTHO05D001770 5.3e-12 75.5 163 43.6
Manes.10G005600 Manihot esculenta HOM05D002277 ORTHO05D001770 1.5e-11 73.9 90 50.0
Carub.0004s2273 Capsella rubella HOM05D002277 ORTHO05D001770 2.6e-11 73.2 180 37.2
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 2.5e-09 66.6 182 37.9
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 3.2e-09 66.2 149 39.6
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 7.2e-09 65.1 157 31.8
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 9.4e-09 64.7 154 40.3
Potri.016G133200 Populus trichocarpa HOM05D002277 ORTHO05D001770 9.4e-09 64.7 164 34.8
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 1.6e-08 63.9 156 36.5
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 2.1e-08 63.5 207 33.3
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 2.1e-08 63.5 184 33.2
A04p30940 Brassica napus HOM05D002277 ORTHO05D001770 3.6e-08 62.8 187 37.4
C04p68330 Brassica napus HOM05D002277 ORTHO05D001770 3.6e-08 62.8 188 37.2
BraA04t18552Z Brassica rapa HOM05D002277 ORTHO05D001770 3.6e-08 62.8 187 37.4
Rhsim09G0183700 Rhododendron simsii HOM05D002277 ORTHO05D001770 3.6e-08 62.8 175 37.1
Prupe.6G289800 Prunus persica HOM05D002277 ORTHO05D001770 4.7e-08 62.4 160 35.0
BcaC02g07305 Brassica carinata HOM05D002277 ORTHO05D001770 6.1e-08 62.0 188 38.8
BolC4t28335H Brassica oleracea HOM05D002277 ORTHO05D001770 6.1e-08 62.0 188 38.8
Gohir.D04G013500 Gossypium hirsutum HOM05D002277 ORTHO05D001770 6.1e-08 62.0 192 34.9
Gorai.012G015800 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.1e-08 62.0 192 34.9
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 7.9e-08 61.6 150 38.0
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 7.9e-08 61.6 178 35.4
Gohir.A05G402100 Gossypium hirsutum HOM05D002277 ORTHO05D001770 7.9e-08 61.6 193 34.7
BcaB06g29146 Brassica carinata HOM05D002277 ORTHO05D001770 1.4e-07 60.8 193 37.8
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 1.4e-07 60.8 165 36.4
Cpa.g.sc19.91 Carica papaya HOM05D002277 ORTHO05D001770 1.8e-07 60.5 87 40.2
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.8e-07 60.5 56 57.1
Ciclev10033390m.g Citrus clementina HOM05D002277 ORTHO05D001770 2.3e-07 60.1 119 39.5
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 2.3e-07 60.1 189 36.5
Gorai.005G006100 Gossypium raimondii HOM05D002277 ORTHO05D001770 3.0e-07 59.7 53 58.5
Sabra04G0150900 Salix brachista HOM05D002277 ORTHO05D001770 3.0e-07 59.7 174 36.8
VMungo1383G3736 Vigna mungo HOM05D002277 ORTHO05D001770 3.9e-07 59.3 172 32.6
Actinidia33883 Actinidia chinensis HOM05D002277 ORTHO05D001770 5.1e-07 58.9 130 36.9
EL10Ac2g04267 Beta vulgaris HOM05D002277 ORTHO05D001770 5.1e-07 58.9 167 34.1
Cc06_g00560 Coffea canephora HOM05D002277 ORTHO05D001770 5.1e-07 58.9 108 40.7
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 6.7e-07 58.5 108 39.8
CsaV3_6G002200 Cucumis sativus L. HOM05D002277 ORTHO05D001770 6.7e-07 58.5 43 72.1
MSTRG.18959 Avicennia marina HOM05D002277 ORTHO05D001770 8.8e-07 58.2 157 33.1
Gohir.D02G005400 Gossypium hirsutum HOM05D002277 ORTHO05D001770 8.8e-07 58.2 53 56.6
MELO3C019998.2 Cucumis melo HOM05D002277 ORTHO05D001770 1.1e-06 57.8 65 55.4
Oeu003223.1 Olea europaea HOM05D002277 ORTHO05D001770 1.1e-06 57.8 100 40.0
Potri.013G083101 Populus trichocarpa HOM05D002277 ORTHO05D001770 1.1e-06 57.8 62 51.6
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 1.1e-06 57.8 157 31.2
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 2.0e-06 57.0 56 55.4
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 3.3e-06 56.2 159 34.0
A09p66660 Brassica napus HOM05D010829 ORTHO05D001770 3.3e-06 56.2 48 56.2
Gohir.A02G005000 Gossypium hirsutum HOM05D002277 ORTHO05D001770 3.3e-06 56.2 106 42.5
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 3.3e-06 56.2 187 31.0
Prupe.6G043800 Prunus persica HOM05D002277 ORTHO05D001770 3.3e-06 56.2 97 39.2
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 3.3e-06 56.2 171 35.7
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 3.3e-06 56.2 189 33.3
Aqoxy85s002 Aquilegia oxysepala HOM05D002277 ORTHO05D001770 5.7e-06 55.5 188 38.3
ClCG11G005770 Citrullus lanatus HOM05D002277 ORTHO05D001770 5.7e-06 55.5 65 52.3
Phvul.008G218400 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.7e-06 55.5 128 35.2
Lsat_1_v5_gn_2_125460 Lactuca sativa HOM05D002277 ORTHO05D001770 7.4e-06 55.1 181 32.6
Rhsim01G0241900 Rhododendron simsii HOM05D002277 ORTHO05D001770 7.4e-06 55.1 165 33.9
Ca_24067_v3 Cicer arietinum L. HOM05D002277 ORTHO05D001770 9.7e-06 54.7 181 30.4
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 9.7e-06 54.7 200 30.5
Rhsim03G0150300 Rhododendron simsii HOM05D002277 ORTHO05D001770 9.7e-06 54.7 56 55.4
VMungo0647G0912 Vigna mungo HOM05D002277 ORTHO05D001770 9.7e-06 54.7 88 43.2


User provided reference genes

Program Settings