Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39843 Brassica carinata HOM05D000020 ORTHO05D039617 1.2e-28 129.0 59 100.0
BcaC07g39860 Brassica carinata HOM05D000020 ORTHO05D001617 1.2e-12 75.9 35 94.3
C08p30450 Brassica napus HOM05D000020 ORTHO05D039617 1.2e-12 75.9 35 94.3
C08p30640 Brassica napus HOM05D000020 ORTHO05D001617 1.2e-12 75.9 35 94.3
BolC8t50681H Brassica oleracea HOM05D000020 ORTHO05D001617 1.2e-12 75.9 35 94.3
A04p04520 Brassica napus HOM05D000020 ORTHO05D001617 4.5e-12 73.9 35 91.4
BraA04t16162Z Brassica rapa HOM05D000020 ORTHO05D001617 4.5e-12 73.9 35 91.4
A09p48350 Brassica napus HOM05D000020 ORTHO05D001617 7.7e-12 73.2 35 91.4
BraA09t40287Z Brassica rapa HOM05D000020 ORTHO05D001617 7.7e-12 73.2 35 91.4
BcaC02g09756 Brassica carinata HOM05D000020 ORTHO05D001617 1.3e-11 72.4 35 88.6
C04p36950 Brassica napus HOM05D000020 ORTHO05D001617 1.3e-11 72.4 35 88.6
BolC4t25260H Brassica oleracea HOM05D000020 ORTHO05D001617 1.3e-11 72.4 35 88.6
BcaB02g08422 Brassica carinata HOM05D000020 ORTHO05D001617 3.8e-11 70.9 35 85.7
BcaB01g00101 Brassica carinata HOM05D000020 ORTHO05D001617 5.0e-11 70.5 35 85.7
Thhalv10010363m.g Eutrema salsugineum HOM05D000020 ORTHO05D001617 8.5e-11 69.7 35 82.9
Sp5g07040 Schrenkiella parvula HOM05D000020 ORTHO05D001617 8.5e-11 69.7 35 82.9
CARHR165450 Cardamine hirsuta HOM05D000020 ORTHO05D001617 4.2e-10 67.4 35 82.9
Carub.0005s2215 Capsella rubella HOM05D000020 ORTHO05D001617 5.5e-10 67.0 35 80.0
AT3G55430 Arabidopsis thaliana HOM05D000020 ORTHO05D001617 7.2e-10 66.6 35 80.0
AL5G36580 Arabidopsis lyrata HOM05D000020 ORTHO05D001617 9.4e-10 66.2 35 77.1
BcaB02g07690 Brassica carinata HOM05D000020 ORTHO05D001617 3.6e-09 64.3 35 77.1
BcaC08g44734 Brassica carinata HOM05D000020 ORTHO05D001617 1.0e-08 62.8 35 74.3
C06p22680 Brassica napus HOM05D000020 ORTHO05D001617 1.0e-08 62.8 35 74.3
A07p22480 Brassica napus HOM05D000020 ORTHO05D001617 1.4e-08 62.4 35 74.3
BraA07t29924Z Brassica rapa HOM05D000020 ORTHO05D001617 1.4e-08 62.4 35 74.3
Aa31LG10G10460 Aethionema arabicum HOM05D000020 ORTHO05D001617 1.1e-07 59.3 35 71.4
THA.LOC104810029 Tarenaya hassleriana HOM05D000020 ORTHO05D001617 2.0e-07 58.5 35 62.9


User provided reference genes

Program Settings