Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 4.5e-98 361.3 187 100.0
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 6.5e-97 357.5 184 100.0
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 9.6e-93 343.6 188 95.7
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 5.8e-90 334.3 189 89.9
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 3.9e-86 321.6 189 88.4
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 1.6e-84 316.2 193 88.1
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 1.9e-80 302.8 195 82.1
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.6e-79 299.7 194 81.4
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 2.1e-79 299.3 195 82.1
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 1.4e-78 296.6 196 79.6
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 2.3e-78 295.8 197 80.7
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 3.3e-77 292.0 196 81.1
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 1.2e-74 283.5 197 81.7
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 4.5e-74 281.6 205 77.1
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 1.9e-72 276.2 196 75.5
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 2.5e-72 275.8 196 75.5
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 3.6e-71 271.9 198 78.8
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 7.9e-71 270.8 200 78.5
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 3.0e-70 268.9 198 78.3
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 5.1e-70 268.1 202 71.3
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.8e-67 259.6 182 75.3
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.7e-65 253.1 198 68.2
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 3.2e-64 248.8 193 68.9
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 3.3e-61 238.8 202 60.4
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 2.8e-60 235.7 195 63.1
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 4.8e-60 235.0 194 67.0
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.1e-59 233.8 193 63.2
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.4e-59 233.4 195 62.6
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.8e-59 233.0 206 64.1
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 2.4e-59 232.6 200 63.5
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 3.1e-59 232.3 199 62.3
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.2e-58 230.3 200 60.5
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.2e-58 230.3 199 63.3
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.2e-58 230.3 199 63.3
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 2.0e-58 229.6 194 61.9
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 2.6e-58 229.2 199 63.3
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.6e-58 229.2 198 62.6
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.6e-58 229.2 198 62.6
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 4.5e-58 228.4 206 63.6
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 7.7e-58 227.6 195 62.6
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 7.7e-58 227.6 194 61.9
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.0e-57 227.3 206 60.7
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 1.0e-57 227.3 204 63.2
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 2.9e-57 225.7 206 61.7
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 2.9e-57 225.7 205 59.5
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 3.8e-57 225.3 206 61.7
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 6.5e-57 224.6 204 62.7
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 6.5e-57 224.6 212 58.0
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.1e-56 223.8 201 62.7
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 3.2e-56 222.2 208 63.0
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 3.2e-56 222.2 216 58.3
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 4.2e-56 221.9 202 62.9
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 5.5e-56 221.5 195 62.6
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 5.5e-56 221.5 215 58.1
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 2.1e-55 219.5 201 62.7
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 2.7e-55 219.2 208 57.2
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 8.0e-55 217.6 213 60.1
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 8.0e-55 217.6 215 60.0
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 1.0e-54 217.2 190 64.2
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 1.0e-54 217.2 210 59.0
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 2.3e-54 216.1 210 56.7
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 5.2e-54 214.9 219 57.1
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 6.8e-54 214.5 198 60.6
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 6.8e-54 214.5 199 60.8
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.2e-53 213.8 210 59.0
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.5e-53 213.4 212 57.1
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 3.4e-53 212.2 200 56.5
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 7.5e-53 211.1 197 58.4
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 7.5e-53 211.1 203 58.6
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.3e-52 210.3 191 56.5
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 1.3e-52 210.3 203 57.6
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 8.3e-52 207.6 198 58.1
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.1e-51 207.2 216 54.2
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 1.4e-51 206.8 199 57.3
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.4e-51 206.8 199 57.3
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 1.8e-51 206.5 204 55.9
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 7.0e-51 204.5 210 58.1
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 7.0e-51 204.5 213 55.4
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.6e-50 203.4 202 57.9
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 2.0e-50 203.0 214 54.2
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 2.7e-50 202.6 220 56.4
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 3.5e-50 202.2 166 63.9
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 7.7e-50 201.1 215 56.3
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.0e-49 200.7 208 57.2
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 1.3e-49 200.3 203 56.7
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.2e-49 199.5 185 58.9
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.9e-49 199.1 211 56.4
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 3.8e-49 198.7 214 54.2
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 5.0e-49 198.4 192 59.9
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 8.5e-49 197.6 208 51.4
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 1.1e-48 197.2 203 54.7
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.5e-48 196.8 176 65.9
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 1.9e-48 196.4 206 52.4
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 4.2e-48 195.3 186 55.4
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 5.5e-48 194.9 206 52.9
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 7.2e-48 194.5 207 50.7
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.6e-47 193.4 212 52.8
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.6e-47 193.4 196 55.1
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.6e-47 193.4 195 55.9
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 6.1e-47 191.4 207 54.6
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 8.0e-47 191.0 206 56.3
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 6.8e-46 188.0 212 50.9
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 1.5e-45 186.8 153 63.4
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.5e-45 186.8 226 49.1
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 2.6e-45 186.0 195 52.8
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 3.4e-45 185.7 205 56.1
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.7e-44 183.3 160 61.2
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 4.1e-43 178.7 205 51.2
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 7.0e-43 177.9 152 63.2
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 5.9e-42 174.9 211 46.4
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 1.0e-41 174.1 133 68.4
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 1.9e-40 169.9 209 47.8
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 1.9e-40 169.9 182 57.1
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 1.0e-38 164.1 217 48.8
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.4e-38 163.7 167 50.3
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 6.8e-38 161.4 200 44.0
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 2.0e-37 159.8 175 49.1
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 1.3e-36 157.1 186 43.0
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 4.9e-36 155.2 182 45.6
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 2.4e-35 152.9 203 42.9
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.0e-34 149.8 128 59.4
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 2.0e-34 149.8 146 52.7
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 3.5e-34 149.1 211 45.0
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.3e-33 147.1 187 43.9
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 4.3e-32 142.1 194 40.7
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 9.5e-32 141.0 138 55.8
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.0e-30 137.5 110 58.2
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 1.0e-30 137.5 196 40.3
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 1.4e-30 137.1 188 40.4
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 1.2e-29 134.0 119 62.2
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 2.6e-29 132.9 213 40.8
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 2.4e-27 126.3 144 48.6
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 3.2e-27 125.9 179 44.1
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 7.0e-27 124.8 137 43.1
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 1.2e-26 124.0 188 35.1
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 7.8e-26 121.3 130 50.8
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 8.6e-25 117.9 137 44.5
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.3e-24 114.8 171 39.8
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 2.8e-23 112.8 99 59.6
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 3.6e-23 112.5 92 52.2
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 5.8e-21 105.1 197 37.1
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 7.5e-21 104.8 121 51.2
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 7.5e-21 104.8 132 40.2
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 1.3e-20 104.0 92 48.9
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 1.7e-20 103.6 90 53.3
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 6.4e-20 101.7 121 50.4
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 7.8e-18 94.7 169 37.3
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 6.6e-17 91.7 86 47.7
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.1e-16 90.9 164 34.1
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.9e-16 90.1 133 36.8
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 1.2e-15 87.4 73 68.5
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 1.2e-15 87.4 111 39.6
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 3.4e-13 79.3 115 46.1
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 3.4e-13 79.3 71 66.2
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 4.1e-11 72.4 112 45.5
AT4G18692 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.2e-10 70.9 63 65.1
AT3G53342 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 3.5e-10 69.3 63 63.5
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 3.9e-09 65.9 103 42.7
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 6.6e-09 65.1 83 47.0
C03p31080 Brassica napus HOM05D004429 ORTHO05D103234 1.1e-08 64.3 55 69.1
AT1G55710 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.9e-08 63.5 63 60.3


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