Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-150 535.4 293 100.0
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-61 238.8 157 79.6
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-60 237.3 157 79.0
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-59 233.8 157 79.0
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-59 233.0 157 77.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-59 233.0 157 77.1
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-54 217.2 157 72.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.8e-54 216.5 157 71.3
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-54 215.7 157 72.0
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.4e-53 214.2 157 71.3
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 8.4e-51 204.9 142 73.9
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 6.6e-48 195.3 144 69.4
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-47 193.0 141 69.5
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 4.3e-47 192.6 158 66.5
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 6.2e-46 188.7 148 66.2
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-43 179.5 358 39.9
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-42 177.6 258 46.5
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 6.7e-40 168.7 146 58.9
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-38 163.7 157 59.2
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.1e-37 159.8 143 61.5
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.2e-36 157.9 143 61.5
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-36 156.4 197 60.9
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-36 155.6 139 59.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-35 154.5 148 54.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-35 152.5 152 57.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 6.5e-35 152.1 148 53.4
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.9e-34 150.6 155 53.5
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-34 150.2 152 55.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-34 149.8 148 52.7
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.7e-33 146.7 155 52.3
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 6.0e-33 145.6 148 52.0
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 6.0e-33 145.6 80 92.5
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 3.9e-32 142.9 151 55.0
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 3.9e-32 142.9 148 51.4
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-32 142.1 146 56.2
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 8.7e-32 141.7 148 50.7
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 4.3e-31 139.4 152 55.3
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 4.3e-31 139.4 152 55.3
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 9.6e-31 138.3 152 54.6
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-30 137.9 157 52.9
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.6e-30 137.5 130 63.1
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.6e-30 137.5 130 63.1
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-29 134.8 152 52.6
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-29 134.4 155 51.0
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-29 132.9 147 48.3
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 6.9e-29 132.1 135 51.9
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 1.2e-28 131.3 135 51.9
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 1.5e-28 131.0 73 91.8
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 4.5e-28 129.4 73 90.4
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 1.3e-27 127.9 130 59.2
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.7e-27 127.5 135 50.4
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-27 127.1 131 55.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-27 126.7 131 54.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-27 126.7 131 55.0
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 6.5e-27 125.6 131 54.2
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-25 121.3 131 53.4
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 6.1e-25 119.0 123 49.6
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 5.1e-24 115.9 73 78.1
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 7.4e-23 112.1 73 76.7
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 2.2e-22 110.5 68 79.4
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 2.8e-22 110.2 141 46.8
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-21 108.2 148 46.6
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 9.0e-21 105.1 61 88.5
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 1.2e-20 104.8 61 86.9
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 1.5e-20 104.4 73 76.7
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-20 103.6 288 35.1
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.9e-18 97.4 105 49.5
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 6.1e-17 92.4 51 92.2
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-16 91.3 103 48.5
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 3.0e-16 90.1 72 66.7
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 6.7e-16 89.0 51 90.2
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-15 87.8 120 45.0
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.0e-15 87.4 53 83.0
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 5.7e-15 85.9 161 35.4
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 8.2e-14 82.0 110 40.0
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 1.1e-13 81.6 86 57.0
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 1.1e-13 81.6 86 57.0
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-13 80.9 147 39.5
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-13 80.9 61 62.3
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-13 80.5 125 39.2
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-13 80.1 56 66.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 3.1e-13 80.1 56 66.1
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 4.1e-13 79.7 51 76.5
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 5.3e-13 79.3 65 64.6
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 5.3e-13 79.3 84 53.6
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 5.3e-13 79.3 67 64.2
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 6.9e-13 79.0 83 54.2
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 6.9e-13 79.0 115 38.3
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 6.9e-13 79.0 114 38.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 9.1e-13 78.6 87 51.7
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.5e-12 77.8 113 38.9
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 1.5e-12 77.8 113 38.9
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 2.0e-12 77.4 113 38.1
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.2e-11 73.9 42 76.2
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 2.2e-11 73.9 109 38.5
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.9e-11 73.6 112 38.4
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-11 73.2 33 97.0
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 5.0e-11 72.8 112 37.5
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-10 71.2 33 93.9
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 1.4e-10 71.2 33 93.9
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 4.2e-10 69.7 107 36.4
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-09 68.2 54 61.1
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-09 68.2 111 35.1
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.4e-08 64.7 59 59.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-08 64.7 61 60.7
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 1.8e-08 64.3 55 65.5
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 1.8e-08 64.3 54 64.8
BolC5t31082H Brassica oleracea HOM05D004128 ORTHO05D024629 1.8e-08 64.3 32 93.8
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-08 63.9 70 60.0
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-08 63.5 74 41.9
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 3.9e-08 63.2 61 52.5
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-08 63.2 74 41.9
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-08 63.2 74 41.9
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 6.7e-08 62.4 70 52.9
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 8.8e-08 62.0 74 40.5
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 1.5e-07 61.2 54 63.0
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 1.5e-07 61.2 54 63.0
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-07 60.8 56 42.9
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-07 60.5 54 64.8
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-07 60.5 49 69.4
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 3.3e-07 60.1 121 35.5
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-07 59.7 49 67.3
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 4.4e-07 59.7 55 43.6
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 7.4e-07 58.9 54 59.3
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-06 58.2 59 62.7
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-06 58.2 49 65.3
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-06 58.2 49 65.3
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 2.2e-06 57.4 75 36.0
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 2.8e-06 57.0 72 47.2
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 2.8e-06 57.0 55 47.3
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 3.7e-06 56.6 110 32.7


User provided reference genes

Program Settings