Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39603 Brassica carinata HOM05D000300 ORTHO05D016697 9.1e-41 169.9 89 100.0
BolC8t50380H Brassica oleracea HOM05D000300 ORTHO05D016697 2.8e-26 121.7 64 98.4
BcaC01g04127 Brassica carinata HOM05D000300 ORTHO05D013472 3.2e-22 108.2 73 82.2
C03p44850 Brassica napus HOM05D000300 ORTHO05D013472 1.2e-21 106.3 72 81.9
BolC3t16746H Brassica oleracea HOM05D000300 ORTHO05D013472 1.2e-21 106.3 72 81.9
C07p10170 Brassica napus HOM05D038712 ORTHO05D016697 1.3e-18 96.3 66 80.3
BolC7t41466H Brassica oleracea HOM05D000300 ORTHO05D016697 2.8e-18 95.1 67 77.6
BcaC06g35873 Brassica carinata HOM05D000300 ORTHO05D016697 4.8e-18 94.4 66 78.8
BcaC06g35874 Brassica carinata HOM05D000300 ORTHO05D016697 4.8e-18 94.4 66 78.8
BcaB04g18633 Brassica carinata HOM05D000300 ORTHO05D021402 1.4e-17 92.8 64 76.6
A03p37020 Brassica napus HOM05D000300 ORTHO05D013472 2.9e-15 85.1 73 63.0
BraA03t12864Z Brassica rapa HOM05D000300 ORTHO05D013472 2.9e-15 85.1 73 63.0
BcaB04g18636 Brassica carinata HOM05D000300 ORTHO05D013472 3.8e-15 84.7 73 61.6
Carub.0003s1068 Capsella rubella HOM05D000300 ORTHO05D013472 5.0e-15 84.3 73 63.0
CARHR100860 Cardamine hirsuta HOM05D000300 ORTHO05D013472 8.6e-15 83.6 73 60.3
BcaC01g04126 Brassica carinata HOM05D000300 ORTHO05D013472 1.5e-14 82.8 73 61.6
C03p44860 Brassica napus HOM05D000300 ORTHO05D013472 1.5e-14 82.8 73 61.6
AL3G22860 Arabidopsis lyrata HOM05D000300 ORTHO05D013472 4.0e-12 74.7 73 57.5
AL3G40150 Arabidopsis lyrata HOM05D000300 ORTHO05D013472 6.8e-12 73.9 73 56.2
AT3G11380 Arabidopsis thaliana HOM05D000300 ORTHO05D013472 2.0e-11 72.4 73 57.5
BcaC04g18808 Brassica carinata HOM05D000300 ORTHO05D016697 2.0e-11 72.4 66 65.2
AL1G41540 Arabidopsis lyrata HOM05D000300 ORTHO05D017381 4.9e-10 67.8 73 52.1
AT1G28020 Arabidopsis thaliana HOM05D000300 ORTHO05D017381 1.6e-08 62.8 73 49.3
BcaC05g26618 Brassica carinata HOM05D000300 ORTHO05D012934 3.5e-08 61.6 82 50.0
CARHR027480 Cardamine hirsuta HOM05D000300 ORTHO05D000383 3.5e-08 61.6 72 45.8
BcaC05g26617 Brassica carinata HOM05D000300 ORTHO05D017381 4.5e-08 61.2 86 44.2
Thhalv10009907m.g Eutrema salsugineum HOM05D000300 ORTHO05D017381 4.5e-08 61.2 72 52.8
CARHR027470 Cardamine hirsuta HOM05D000300 ORTHO05D012934 1.0e-07 60.1 74 48.6
Thhalv10027393m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 1.0e-07 60.1 71 46.5
A01p09220 Brassica napus HOM05D000300 ORTHO05D000383 2.3e-07 58.9 70 44.3
BraA01t00865Z Brassica rapa HOM05D000300 ORTHO05D000383 2.3e-07 58.9 70 44.3
BraA09t39325Z Brassica rapa HOM05D000300 ORTHO05D017381 2.3e-07 58.9 88 42.0
C01p10800 Brassica napus HOM05D000300 ORTHO05D000383 2.9e-07 58.5 70 44.3
BolC1t01041H Brassica oleracea HOM05D000300 ORTHO05D000383 2.9e-07 58.5 70 44.3
CARHR027450 Cardamine hirsuta HOM05D000300 ORTHO05D013482 8.6e-07 57.0 78 47.4
AT1G28000 Arabidopsis thaliana HOM05D000300 ORTHO05D013482 1.1e-06 56.6 76 46.1
BraA09t39326Z Brassica rapa HOM05D000300 ORTHO05D017381 1.1e-06 56.6 82 48.8
Thhalv10009763m.g Eutrema salsugineum HOM05D000300 ORTHO05D013482 1.5e-06 56.2 76 46.1
AT3G11350 Arabidopsis thaliana HOM05D000300 ORTHO05D013472 5.6e-06 54.3 60 46.7
C05p26670 Brassica napus HOM05D000300 ORTHO05D017381 5.6e-06 54.3 82 47.6
Carub.0001s2645 Capsella rubella HOM05D000300 ORTHO05D013482 5.6e-06 54.3 76 46.1


User provided reference genes

Program Settings