Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39570 Brassica carinata HOM05D011938 ORTHO05D013958 4.9e-33 144.1 82 100.0
BcaC07g39572 Brassica carinata HOM05D011938 ORTHO05D013958 2.7e-23 111.7 54 100.0
BcaC07g39567 Brassica carinata HOM05D011938 ORTHO05D013958 8.7e-22 106.7 56 92.9
C08p26230 Brassica napus HOM05D011938 ORTHO05D013958 8.7e-22 106.7 56 92.9
BcaB01g00557 Brassica carinata HOM05D011938 ORTHO05D013958 1.0e-17 93.2 56 82.1
Sp5g11230 Schrenkiella parvula HOM05D011938 ORTHO05D013958 1.9e-16 89.0 54 83.3
A09p44090 Brassica napus HOM05D011938 ORTHO05D013958 5.5e-16 87.4 44 93.2
BraA09t39867Z Brassica rapa HOM05D011938 ORTHO05D013958 5.5e-16 87.4 44 93.2
BolC8t50241H Brassica oleracea HOM05D011938 ORTHO05D013958 3.3e-13 78.2 39 94.9
AT3G50980 Arabidopsis thaliana HOM05D011938 ORTHO05D013958 2.8e-12 75.1 60 71.7
AL5G31400 Arabidopsis lyrata HOM05D011938 ORTHO05D013958 3.7e-12 74.7 60 73.3
CARHR160550 Cardamine hirsuta HOM05D011938 ORTHO05D013958 1.5e-10 69.3 59 67.8
Thhalv10010821m.g Eutrema salsugineum HOM05D011938 ORTHO05D013958 2.0e-10 68.9 58 69.0
Carub.0005s1738 Capsella rubella HOM05D011938 ORTHO05D013958 2.7e-07 58.5 56 64.3


User provided reference genes

Program Settings