Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 2.2e-114 415.6 206 100.0
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 2.2e-114 415.6 206 100.0
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 2.8e-93 345.5 187 89.8
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-92 343.6 185 90.8
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 7.1e-89 330.9 182 91.8
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-80 302.4 182 86.3
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 2.7e-80 302.4 182 86.3
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.5e-75 286.6 182 79.7
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 5.3e-60 235.0 200 63.0
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 4.4e-54 215.3 206 55.8
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 4.4e-54 215.3 206 55.8
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 9.7e-54 214.2 202 58.4
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.7e-54 214.2 209 55.5
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-53 213.0 188 56.4
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.9e-51 204.9 211 54.5
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 2.2e-50 203.0 183 64.5
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 5.5e-49 198.4 167 66.5
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.6e-48 196.8 184 56.0
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.3e-46 189.1 164 55.5
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 4.4e-46 188.7 208 53.8
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.8e-45 185.3 194 52.6
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 2.9e-42 176.0 222 45.9
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.7e-38 161.8 229 44.1
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.7e-37 160.2 158 53.8
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-37 159.8 157 52.2
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.2e-37 159.8 162 50.6
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 1.4e-36 157.1 156 47.4
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 1.4e-36 157.1 156 47.4
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.1e-36 156.0 182 47.8
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-35 152.9 156 46.8
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 1.7e-34 150.2 156 46.2
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 5.0e-34 148.7 156 45.5
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 5.0e-34 148.7 156 45.5
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.1e-33 147.5 189 42.9
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.9e-33 146.7 184 45.1
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.2e-33 145.6 184 45.1
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 2.8e-32 142.9 156 44.2
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 5.2e-31 138.7 90 72.2
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.9e-31 137.9 185 43.2
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.0e-30 136.7 186 45.2
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.0e-30 136.7 183 43.2
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 3.4e-30 136.0 156 43.6
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 3.4e-30 136.0 186 46.2
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 2.2e-29 133.3 100 65.0
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.7e-29 132.5 147 46.9
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 6.3e-29 131.7 187 43.9
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.0e-27 126.7 185 44.3
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.0e-27 126.7 147 46.3
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.5e-27 125.6 195 39.5
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 2.5e-25 119.8 183 42.6
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 9.5e-25 117.9 198 40.9
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 9.5e-25 117.9 183 42.1
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 1.2e-24 117.5 190 39.5
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.6e-24 117.1 188 38.3
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.6e-24 115.9 159 40.3
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 6.1e-24 115.2 152 43.4
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 1.0e-23 114.4 198 39.9
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.4e-23 114.0 191 40.3
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 1.4e-23 114.0 189 39.2
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-23 113.6 127 47.2
BcaC07g39503 Brassica carinata HOM05D007494 ORTHO05D032917 3.0e-23 112.8 107 58.9
C08p25480 Brassica napus HOM05D007494 ORTHO05D032917 3.0e-23 112.8 107 58.9
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 3.0e-23 112.8 198 40.9
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 6.8e-23 111.7 180 42.2
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 6.8e-23 111.7 203 36.5
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-22 110.5 179 40.8
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.6e-22 109.8 181 39.2
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 5.8e-22 108.6 196 38.8
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 7.5e-22 108.2 155 38.1
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-21 107.5 129 41.9
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 6.4e-21 105.1 191 37.7
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 3.2e-20 102.8 105 52.4
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.4e-20 102.1 107 50.5
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 7.0e-20 101.7 152 42.1
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.0e-18 96.3 201 35.3
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 1.9e-17 93.6 106 51.9
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.3e-17 92.8 143 37.1
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 4.3e-17 92.4 76 65.8
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-14 84.0 91 49.5
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 5.8e-14 82.0 166 35.5
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 7.5e-14 81.6 97 45.4
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.7e-13 80.5 186 31.7
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 1.1e-09 67.8 82 46.3
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 1.5e-09 67.4 67 53.7
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.3e-09 65.1 43 72.1
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 2.1e-08 63.5 156 32.1
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-06 57.8 33 78.8


User provided reference genes

Program Settings