Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39227 Brassica carinata HOM05D009416 ORTHO05D095777 2.9e-211 738.4 410 100.0
C08p22220 Brassica napus HOM05D009416 ORTHO05D014496 8.0e-124 448.0 228 98.7
BolC8t49867H Brassica oleracea HOM05D009416 ORTHO05D014496 3.9e-123 445.7 228 98.2
A08p27920 Brassica napus HOM05D009416 ORTHO05D014496 6.1e-116 421.8 228 93.0
BraA08t34723Z Brassica rapa HOM05D009416 ORTHO05D014496 6.1e-116 421.8 228 93.0
BcaB03g11965 Brassica carinata HOM05D009416 ORTHO05D014496 4.5e-111 405.6 229 89.1
C04p52250 Brassica napus HOM05D009416 ORTHO05D024478 3.3e-53 213.4 236 53.8
BcaC02g08587 Brassica carinata HOM05D009416 ORTHO05D024478 5.6e-53 212.6 236 53.4
A04p17500 Brassica napus HOM05D009416 ORTHO05D024055 6.2e-52 209.1 233 51.5
BraA04t17372Z Brassica rapa HOM05D009416 ORTHO05D024478 8.1e-52 208.8 235 52.3
BolC4t26802H Brassica oleracea HOM05D009416 ORTHO05D024055 1.1e-51 208.4 233 51.5
BraA04t17373Z Brassica rapa HOM05D009416 ORTHO05D024055 1.4e-51 208.0 233 51.1
A04p17490 Brassica napus HOM05D009416 ORTHO05D024478 2.4e-51 207.2 235 51.9
BolC4t26801H Brassica oleracea HOM05D009416 ORTHO05D024478 2.4e-51 207.2 236 52.5
C04p52260 Brassica napus HOM05D009416 ORTHO05D024055 1.8e-46 191.0 233 49.8
C08p22200 Brassica napus HOM05D009416 ORTHO05D014496 1.9e-45 187.6 232 47.4
BcaC02g08586 Brassica carinata HOM05D009416 ORTHO05D024055 2.1e-44 184.1 233 48.5
BcaB03g11964 Brassica carinata HOM05D009416 ORTHO05D014496 5.3e-43 179.5 233 46.8
A08p27930 Brassica napus HOM05D009416 ORTHO05D014496 4.6e-39 166.4 232 44.8
BraA08t34724Z Brassica rapa HOM05D009416 ORTHO05D014496 4.6e-39 166.4 232 44.8
BolC8t49866H Brassica oleracea HOM05D009416 ORTHO05D014496 8.4e-33 145.6 192 45.3
Sp1g21300 Schrenkiella parvula HOM05D009416 ORTHO05D014496 3.4e-26 123.6 229 38.4
BcaC08g45002 Brassica carinata HOM05D000402 ORTHO05D024339 2.2e-25 120.9 135 56.3
Sp1g28840 Schrenkiella parvula HOM05D009416 ORTHO05D014496 2.5e-24 117.5 193 39.9
BolC7t45230H Brassica oleracea HOM05D021383 ORTHO05D024339 1.6e-23 114.8 132 56.8
C06p26360 Brassica napus HOM05D021383 ORTHO05D024339 1.5e-21 108.2 130 53.8
BcaC05g26299 Brassica carinata HOM05D009416 ORTHO05D027760 6.9e-19 99.4 212 35.4
BcaB07g32375 Brassica carinata HOM05D009416 ORTHO05D027760 2.6e-18 97.4 224 35.3
BcaB01g02316 Brassica carinata HOM05D021383 ORTHO05D024339 3.6e-15 87.0 95 60.0
BcaB03g12680 Brassica carinata HOM05D031291 ORTHO05D027130 6.7e-14 82.8 140 38.6
Sp1g21320 Schrenkiella parvula HOM05D009416 ORTHO05D014496 5.7e-13 79.7 179 33.5
Sp1g21280 Schrenkiella parvula HOM05D008804 ORTHO05D011259 8.2e-12 75.9 123 40.7
BcaB03g11961 Brassica carinata HOM05D008804 ORTHO05D011259 1.1e-11 75.5 116 39.7
Sp1g21290 Schrenkiella parvula HOM05D008804 ORTHO05D011259 5.9e-10 69.7 113 40.7
A07p13490 Brassica napus HOM05D008804 ORTHO05D011259 1.3e-09 68.6 113 40.7
BraA07t29120Z Brassica rapa HOM05D008804 ORTHO05D011259 2.2e-09 67.8 113 40.7
A08p27950 Brassica napus HOM05D008804 ORTHO05D011259 2.9e-09 67.4 116 37.9
C08p22180 Brassica napus HOM05D008804 ORTHO05D011259 2.9e-09 67.4 116 37.9
BolC8t49864H Brassica oleracea HOM05D008804 ORTHO05D011259 2.9e-09 67.4 116 37.9
BraA08t34726Z Brassica rapa HOM05D008804 ORTHO05D011259 2.9e-09 67.4 116 37.9
BcaB03g14125 Brassica carinata HOM05D008804 ORTHO05D011259 3.8e-09 67.0 113 38.9
C07p25990 Brassica napus HOM05D008804 ORTHO05D011259 6.5e-09 66.2 113 39.8
BolC7t43128H Brassica oleracea HOM05D008804 ORTHO05D011259 6.5e-09 66.2 113 39.8
C07p20130 Brassica napus HOM05D008804 ORTHO05D011259 1.1e-08 65.5 113 39.8
BolC7t42534H Brassica oleracea HOM05D008804 ORTHO05D011259 1.1e-08 65.5 113 39.8
A07p13680 Brassica napus HOM05D008804 ORTHO05D011259 2.5e-08 64.3 109 40.4
A08p27940 Brassica napus HOM05D008804 ORTHO05D011259 3.2e-08 63.9 113 37.2
BraA08t34725Z Brassica rapa HOM05D008804 ORTHO05D011259 3.2e-08 63.9 113 37.2
BcaC07g39226 Brassica carinata HOM05D009416 ORTHO05D014496 5.5e-08 63.2 123 35.8
C08p22190 Brassica napus HOM05D008804 ORTHO05D011259 9.4e-08 62.4 113 37.2
BolC8t49865H Brassica oleracea HOM05D008804 ORTHO05D011259 9.4e-08 62.4 113 37.2
BcaB03g11962 Brassica carinata HOM05D008804 ORTHO05D011259 2.7e-07 60.8 113 37.2
BcaC07g39223 Brassica carinata HOM05D008804 ORTHO05D011259 2.3e-06 57.8 79 43.0
BcaB05g22564 Brassica carinata HOM05D008804 ORTHO05D011259 8.8e-06 55.8 70 45.7


User provided reference genes

Program Settings