Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39209 Brassica carinata HOM05D000693 ORTHO05D018669 8.7e-177 623.6 339 100.0
C08p22020 Brassica napus HOM05D000693 ORTHO05D018669 3.2e-126 455.7 460 64.3
C08p21970 Brassica napus HOM05D000693 ORTHO05D018669 1.3e-82 310.8 477 44.7
BolC8t49833H Brassica oleracea HOM05D000693 ORTHO05D018669 1.3e-82 310.8 477 44.7
BolC8t49843H Brassica oleracea HOM05D000693 ORTHO05D002444 3.4e-80 302.8 177 100.0
BraA08t34745Z Brassica rapa HOM05D000693 ORTHO05D018669 4.2e-78 295.8 478 42.1
BolC8t49842H Brassica oleracea HOM05D000693 ORTHO05D002444 3.8e-71 272.7 174 82.8
BcaB03g11948 Brassica carinata HOM05D000693 ORTHO05D018669 5.9e-64 248.8 440 39.5
BraA08t34744Z Brassica rapa HOM05D000693 ORTHO05D002444 5.9e-64 248.8 152 85.5
BcaB03g11951 Brassica carinata HOM05D000693 ORTHO05D002444 1.6e-61 240.7 178 68.0
BolC8t49844H Brassica oleracea HOM05D000693 ORTHO05D002444 4.3e-59 232.6 178 77.0
BcaB03g11949 Brassica carinata HOM05D000693 ORTHO05D002444 2.8e-58 229.9 152 79.6
A08p28100 Brassica napus HOM05D000693 ORTHO05D002444 3.7e-58 229.6 177 66.1
BraA08t34738Z Brassica rapa HOM05D000693 ORTHO05D002444 3.7e-58 229.6 177 66.1
C08p22030 Brassica napus HOM05D000693 ORTHO05D002444 3.1e-57 226.5 178 75.8
BcaC07g39211 Brassica carinata HOM05D000693 ORTHO05D002444 6.9e-57 225.3 177 78.0
C08p22070 Brassica napus HOM05D000693 ORTHO05D002444 9.1e-57 224.9 177 78.0
BolC8t49851H Brassica oleracea HOM05D000693 ORTHO05D002444 9.1e-57 224.9 177 78.0
A08p28120 Brassica napus HOM05D000693 ORTHO05D018669 1.3e-55 221.1 568 35.6
BcaC07g39210 Brassica carinata HOM05D000693 ORTHO05D002444 1.5e-48 197.6 170 64.1
BcaC07g39206 Brassica carinata HOM05D000693 ORTHO05D018669 6.5e-47 192.2 155 68.4
BcaB03g11950 Brassica carinata HOM05D000693 ORTHO05D002444 5.5e-46 189.1 179 58.1
Sp1g21070 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.8e-44 184.1 392 34.2
BcaNung00292 Brassica carinata HOM05D000693 ORTHO05D002444 6.7e-44 182.2 179 53.6
Sp1g21000 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.7e-42 177.6 177 55.4
Sp1g21050 Schrenkiella parvula HOM05D000693 ORTHO05D002444 4.5e-40 169.5 177 52.5
Thhalv10010034m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 8.5e-39 165.2 178 52.2
C07p20380 Brassica napus HOM05D000693 ORTHO05D002444 1.2e-37 161.4 359 31.8
BraA09t36400Z Brassica rapa HOM05D000693 ORTHO05D002444 9.7e-35 151.8 177 46.3
A09p07460 Brassica napus HOM05D000693 ORTHO05D002444 3.7e-34 149.8 176 46.0
BcaC04g23434 Brassica carinata HOM05D000693 ORTHO05D002444 1.8e-33 147.5 176 48.3
A07p13830 Brassica napus HOM05D000693 ORTHO05D002444 1.8e-33 147.5 264 34.8
C09p08370 Brassica napus HOM05D000693 ORTHO05D002444 1.8e-33 147.5 176 48.3
BolC9t53747H Brassica oleracea HOM05D000693 ORTHO05D002444 1.8e-33 147.5 176 48.3
BcaB02g07976 Brassica carinata HOM05D000693 ORTHO05D002444 5.3e-33 146.0 176 48.3
AL1G37410 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 7.0e-33 145.6 227 42.7
Sp1g21090 Schrenkiella parvula HOM05D000693 ORTHO05D002444 7.0e-33 145.6 212 42.5
AT1G23600 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 2.7e-32 143.7 231 39.4
BcaNung01417 Brassica carinata HOM05D000693 ORTHO05D002444 1.3e-31 141.4 176 45.5
Sp1g21040 Schrenkiella parvula HOM05D000693 ORTHO05D002444 2.5e-30 137.1 177 42.9
BcaB03g14143 Brassica carinata HOM05D000693 ORTHO05D002444 1.0e-28 131.7 177 43.5
AL1G37330 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.4e-28 131.3 223 39.0
AL1G37340 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.8e-28 131.0 177 44.1
A07p13820 Brassica napus HOM05D000693 ORTHO05D002444 1.8e-28 131.0 345 30.1
AL1G37430 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 3.0e-28 130.2 212 38.2
BolC7t42558H Brassica oleracea HOM05D000693 ORTHO05D002444 1.5e-27 127.9 397 29.0
Thhalv10008137m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 1.5e-27 127.9 205 41.5
BcaC06g35044 Brassica carinata HOM05D000693 ORTHO05D002444 3.4e-27 126.7 177 41.8
BolC7t42559H Brassica oleracea HOM05D000693 ORTHO05D002444 3.4e-27 126.7 177 41.8
AL1G37440 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.7e-26 124.4 235 36.6
Sp1g20950 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.7e-26 124.4 178 39.9
Carub.0001s2316 Capsella rubella HOM05D000693 ORTHO05D002444 3.7e-26 123.2 229 38.9
BraA07t29134Z Brassica rapa HOM05D000693 ORTHO05D002444 4.1e-25 119.8 397 27.7
Carub.0001s2314 Capsella rubella HOM05D000693 ORTHO05D002444 4.1e-25 119.8 207 38.6
AL1G37350 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 7.0e-25 119.0 217 35.9
Carub.0001s2320 Capsella rubella HOM05D000693 ORTHO05D002444 9.1e-25 118.6 183 38.8
Carub.0001s2313 Capsella rubella HOM05D000693 ORTHO05D002444 2.7e-24 117.1 175 41.1
Thhalv10009760m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 3.5e-24 116.7 334 30.2
Sp1g21010 Schrenkiella parvula HOM05D000693 ORTHO05D002444 3.5e-24 116.7 249 34.1
AT2G27670 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 5.9e-24 115.9 233 36.5
Sp1g21060 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.0e-23 115.2 177 40.1
Carub.0001s2317 Capsella rubella HOM05D000693 ORTHO05D002444 2.3e-23 114.0 406 30.8
AT1G23660 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 2.9e-23 113.6 178 37.1
BcaB03g14142 Brassica carinata HOM05D000693 ORTHO05D002444 3.8e-23 113.2 253 31.2
Carub.0004s0837 Capsella rubella HOM05D000693 ORTHO05D002444 4.2e-22 109.8 252 33.7
AL1G37390 Arabidopsis lyrata HOM05D000693 ORTHO05D023638 9.5e-22 108.6 157 45.2
Thhalv10028680m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 9.5e-22 108.6 200 36.0
AL1G37380 Arabidopsis lyrata HOM05D000693 ORTHO05D023638 3.6e-21 106.7 189 34.9
C07p20370 Brassica napus HOM05D000693 ORTHO05D002444 3.6e-21 106.7 253 31.2
AL4G22700 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 6.1e-21 105.9 250 34.0
Sp1g20960 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.4e-20 104.8 177 35.6
AT1G23640 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 3.0e-20 103.6 125 44.8
AL1G37370 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 5.2e-20 102.8 142 40.8
AL1G37400 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 5.2e-20 102.8 196 36.2
AT1G23690 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 6.8e-20 102.4 166 43.4
BcaB03g14141 Brassica carinata HOM05D000693 ORTHO05D002444 8.9e-20 102.1 253 29.6
AT1G23590 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 1.2e-19 101.7 105 42.9
Carub.0001s2315 Capsella rubella HOM05D000693 ORTHO05D002444 1.5e-19 101.3 196 34.7
Sp1g21030 Schrenkiella parvula HOM05D000693 ORTHO05D002444 3.4e-19 100.1 179 32.4
Sp1g21100 Schrenkiella parvula HOM05D000693 ORTHO05D002444 3.4e-19 100.1 104 48.1
CARHR024070 Cardamine hirsuta HOM05D000693 ORTHO05D002444 7.5e-19 99.0 155 41.9
Carub.0001s2321 Capsella rubella HOM05D000693 ORTHO05D002444 2.2e-18 97.4 165 40.0
AT1G23670 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 2.8e-18 97.1 184 34.8
Sp6g05890 Schrenkiella parvula HOM05D000693 ORTHO05D002444 6.3e-18 95.9 215 34.0
Thhalv10008632m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 8.3e-18 95.5 155 37.4
A09p41110 Brassica napus HOM05D000693 ORTHO05D002444 1.4e-17 94.7 189 36.0
BraA09t39603Z Brassica rapa HOM05D000693 ORTHO05D002444 1.4e-17 94.7 189 36.0
Carub.0001s2306 Capsella rubella HOM05D000693 ORTHO05D002444 2.4e-17 94.0 237 31.6
BcaC06g35045 Brassica carinata HOM05D000693 ORTHO05D002444 3.2e-17 93.6 158 34.8
BolC5t30989H Brassica oleracea HOM05D000693 ORTHO05D002444 7.0e-17 92.4 189 36.0
CARHR024090 Cardamine hirsuta HOM05D000693 ORTHO05D023638 7.0e-17 92.4 146 40.4
C05p22900 Brassica napus HOM05D000693 ORTHO05D002444 9.2e-17 92.0 189 36.0
BcaB03g11952 Brassica carinata HOM05D000693 ORTHO05D002444 2.7e-16 90.5 176 31.8
AT1G23560 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 7.8e-16 89.0 179 32.4
Sp1g20930 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.0e-15 88.6 183 33.9
A08p28090 Brassica napus HOM05D000693 ORTHO05D002444 1.3e-15 88.2 176 31.8
BraA08t34735Z Brassica rapa HOM05D000693 ORTHO05D002444 1.3e-15 88.2 176 31.8
AL1G37270 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.7e-15 87.8 152 38.2
Thhalv10010008m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 1.7e-15 87.8 151 35.8
AT1G23520 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 2.3e-15 87.4 212 33.0
CARHR023990 Cardamine hirsuta HOM05D000693 ORTHO05D002444 6.6e-15 85.9 234 28.2
Sp1g20940 Schrenkiella parvula HOM05D000693 ORTHO05D002444 6.6e-15 85.9 155 38.7
AT1G23645 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 1.1e-14 85.1 222 32.9
Thhalv10008486m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 1.5e-14 84.7 156 39.7
Aa31LG7G7500 Aethionema arabicum HOM05D000693 ORTHO05D002444 1.2e-13 81.6 103 39.8
AL1G37320 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.6e-13 81.3 180 30.6
BcaB07g32346 Brassica carinata HOM05D000693 ORTHO05D002444 1.6e-13 81.3 158 36.1
Carub.0001s2305 Capsella rubella HOM05D000693 ORTHO05D002444 1.6e-13 81.3 153 39.9
BcaC07g39205 Brassica carinata HOM05D000693 ORTHO05D002444 2.1e-13 80.9 67 71.6
BcaB03g11947 Brassica carinata HOM05D000693 ORTHO05D002444 3.6e-13 80.1 154 34.4
CARHR024100 Cardamine hirsuta HOM05D000693 ORTHO05D002444 3.6e-13 80.1 151 34.4
Thhalv10009581m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 3.6e-13 80.1 95 47.4
C08p22080 Brassica napus HOM05D000693 ORTHO05D002444 1.0e-12 78.6 104 37.5
CARHR023940 Cardamine hirsuta HOM05D000693 ORTHO05D002444 1.4e-12 78.2 150 38.0
C07p20350 Brassica napus HOM05D000693 ORTHO05D002444 1.8e-12 77.8 154 31.8
Carub.0001s2310 Capsella rubella HOM05D000693 ORTHO05D002444 2.3e-12 77.4 180 29.4
CARHR024020 Cardamine hirsuta HOM05D000693 ORTHO05D023638 3.1e-12 77.0 181 37.0
BraA09t39080Z Brassica rapa HOM05D000693 ORTHO05D002444 4.0e-12 76.6 154 34.4
AT1G23570 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 8.9e-12 75.5 234 35.0
CARHR024030 Cardamine hirsuta HOM05D000693 ORTHO05D002444 8.9e-12 75.5 154 36.4
BcaB03g14140 Brassica carinata HOM05D000693 ORTHO05D002444 1.2e-11 75.1 172 29.7
BcaC05g27098 Brassica carinata HOM05D000693 ORTHO05D002444 1.2e-11 75.1 154 33.8
BcaC05g27099 Brassica carinata HOM05D000693 ORTHO05D002444 1.2e-11 75.1 154 33.8
BcaC06g35046 Brassica carinata HOM05D000693 ORTHO05D002444 1.2e-11 75.1 173 30.1
C05p29840 Brassica napus HOM05D000693 ORTHO05D002444 1.2e-11 75.1 154 33.8
BolC5t31715H Brassica oleracea HOM05D000693 ORTHO05D002444 1.2e-11 75.1 154 33.8
BolC7t42555H Brassica oleracea HOM05D000693 ORTHO05D002444 1.2e-11 75.1 173 30.1
BcaB07g33961 Brassica carinata HOM05D000693 ORTHO05D002444 2.0e-11 74.3 182 31.9
BraA07t29131Z Brassica rapa HOM05D000693 ORTHO05D002444 2.6e-11 73.9 173 30.1
A09p35540 Brassica napus HOM05D000693 ORTHO05D002444 3.4e-11 73.6 154 33.8
BcaB07g32728 Brassica carinata HOM05D000693 ORTHO05D002444 4.4e-11 73.2 151 35.1
A09p53180 Brassica napus HOM05D000693 ORTHO05D002444 4.4e-11 73.2 182 31.3
BolC8t51178H Brassica oleracea HOM05D000693 ORTHO05D002444 5.8e-11 72.8 182 30.8
Sp1g21080 Schrenkiella parvula HOM05D000693 ORTHO05D002444 5.8e-11 72.8 96 43.8
BcaB05g24927 Brassica carinata HOM05D000693 ORTHO05D002444 7.5e-11 72.4 164 31.1
BcaC07g40615 Brassica carinata HOM05D000693 ORTHO05D002444 1.3e-10 71.6 182 30.8
BraA09t40743Z Brassica rapa HOM05D000693 ORTHO05D002444 1.3e-10 71.6 182 31.3
C08p35950 Brassica napus HOM05D000693 ORTHO05D002444 3.7e-10 70.1 182 30.8
Carub.0001s2319 Capsella rubella HOM05D000693 ORTHO05D002444 1.1e-09 68.6 111 35.1
Oeu056404.1 Olea europaea HOM05D000693 ORTHO05D002444 2.4e-09 67.4 102 30.4
Ah.03g132760 Amaranthus hybridus HOM05D000693 ORTHO05D002444 3.2e-09 67.0 114 31.6
CARHR024000 Cardamine hirsuta HOM05D000693 ORTHO05D002444 3.2e-09 67.0 143 40.6
AUR62005392 Chenopodium quinoa HOM05D000693 ORTHO05D002444 4.1e-09 66.6 102 30.4
Manes.12G027600 Manihot esculenta HOM05D000693 ORTHO05D002444 4.1e-09 66.6 103 31.1
THA.LOC109117023 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 5.4e-09 66.2 96 34.4
BcaC05g26270 Brassica carinata HOM05D000693 ORTHO05D002444 9.2e-09 65.5 158 34.8
A09p41160 Brassica napus HOM05D000693 ORTHO05D002444 9.2e-09 65.5 158 34.8
C05p22820 Brassica napus HOM05D000693 ORTHO05D002444 9.2e-09 65.5 158 34.8
BolC5t30981H Brassica oleracea HOM05D000693 ORTHO05D002444 9.2e-09 65.5 158 34.8
BraA09t39608Z Brassica rapa HOM05D000693 ORTHO05D002444 9.2e-09 65.5 158 34.8
Thhalv10008736m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 1.2e-08 65.1 148 35.1
SalBow2G3571 Salvia bowleyana HOM05D000693 ORTHO05D000554 1.2e-08 65.1 157 31.2
AL1G37420 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 2.7e-08 63.9 139 33.8
Ah.02g129980 Amaranthus hybridus HOM05D000693 ORTHO05D001102 3.5e-08 63.5 103 32.0
Dinv15283 Davidia involucrata HOM05D000693 ORTHO05D002444 7.8e-08 62.4 146 27.4
BcaB07g32342 Brassica carinata HOM05D000693 ORTHO05D002444 1.0e-07 62.0 151 35.1
Carub.0001s2318 Capsella rubella HOM05D000693 ORTHO05D002444 1.0e-07 62.0 177 28.2
SGA_v2.0_scaffold165G38236 Striga asiatica HOM05D000693 ORTHO05D002444 1.0e-07 62.0 163 29.4
AUR62014054 Chenopodium quinoa HOM05D000693 ORTHO05D002444 1.7e-07 61.2 109 28.4
MBI16_g27092_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D002444 1.7e-07 61.2 102 31.4
VMungo0251G3059 Vigna mungo HOM05D000693 ORTHO05D002444 1.7e-07 61.2 102 31.4
Duzib251G0648 Durio zibethinus HOM05D000693 ORTHO05D002444 3.0e-07 60.5 102 29.4
Duzib268G0613 Durio zibethinus HOM05D000693 ORTHO05D002444 3.0e-07 60.5 102 29.4
Gohir.A05G314100 Gossypium hirsutum HOM05D000693 ORTHO05D002444 3.0e-07 60.5 102 30.4
THA.LOC104822970 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 3.0e-07 60.5 102 29.4
AL2G29850 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 5.0e-07 59.7 122 31.1
Gorai.009G337600 Gossypium raimondii HOM05D000693 ORTHO05D002444 5.0e-07 59.7 102 30.4
THA.LOC104822153 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 5.0e-07 59.7 148 30.4
Gohir.D05G315600 Gossypium hirsutum HOM05D000693 ORTHO05D002444 8.6e-07 58.9 102 30.4
HPP92_008037 Vanilla planifolia HOM05D000693 ORTHO05D002444 1.1e-06 58.5 151 26.5
Carub.0002s1716 Capsella rubella HOM05D000693 ORTHO05D002444 1.9e-06 57.8 122 29.5
Hma1.2p1_0160F.1_g070960 Hydrangea macrophylla HOM05D000693 ORTHO05D002444 1.9e-06 57.8 148 28.4
Lsat_1_v5_gn_4_5501 Lactuca sativa HOM05D000693 ORTHO05D002444 1.9e-06 57.8 144 27.8
Gohir.A01G161600 Gossypium hirsutum HOM05D000693 ORTHO05D002444 2.5e-06 57.4 103 31.1
Gohir.D01G149000 Gossypium hirsutum HOM05D000693 ORTHO05D002444 2.5e-06 57.4 103 31.1
Gorai.002G185100 Gossypium raimondii HOM05D000693 ORTHO05D002444 2.5e-06 57.4 103 31.1
BraA07t29132Z Brassica rapa HOM05D000693 ORTHO05D107898 3.3e-06 57.0 96 36.5
AT1G70480 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 4.3e-06 56.6 122 30.3
Gorai.008G159400 Gossypium raimondii HOM05D000693 ORTHO05D002444 4.3e-06 56.6 102 28.4
CARHR063640 Cardamine hirsuta HOM05D000693 ORTHO05D002444 5.6e-06 56.2 122 28.7
PGR119G0615 Punica granatum HOM05D000693 ORTHO05D002444 5.6e-06 56.2 102 28.4
AT1G23580 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 7.3e-06 55.8 48 54.2


User provided reference genes

Program Settings