Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 7.7e-67 256.9 121 100.0
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 8.5e-66 253.4 121 98.3
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 8.2e-61 236.9 113 98.2
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 9.4e-57 223.4 121 86.0
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.6e-56 222.6 122 87.7
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 6.1e-56 220.7 113 92.9
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.8e-55 219.2 122 86.1
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 6.7e-55 217.2 126 84.9
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 9.4e-49 196.8 121 77.7
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.7e-48 195.3 121 76.9
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 4.7e-48 194.5 121 77.7
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 4.5e-43 177.9 122 69.7
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 4.4e-38 161.4 119 65.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 5.4e-36 154.5 101 67.3
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.6e-35 152.9 111 64.9
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-35 152.1 76 86.8
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-35 152.1 76 86.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 4.5e-35 151.4 103 68.9
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 4.5e-35 151.4 75 86.7
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 7.8e-35 150.6 103 68.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.0e-34 150.2 86 76.7
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.3e-34 149.8 80 80.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 2.9e-34 148.7 81 81.5
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.9e-34 148.7 83 77.1
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 3.8e-34 148.3 97 71.1
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 6.6e-34 147.5 121 62.8
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.1e-33 146.7 126 56.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.9e-33 146.0 85 77.6
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.9e-33 146.0 94 70.2
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.9e-33 146.0 80 81.2
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.5e-33 145.6 75 82.7
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 3.3e-33 145.2 96 67.7
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 4.3e-33 144.8 80 78.8
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.3e-33 144.8 99 66.7
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 5.6e-33 144.4 81 80.2
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 7.3e-33 144.1 84 76.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.2e-32 143.3 76 80.3
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 2.1e-32 142.5 72 83.3
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.8e-32 142.1 76 84.2
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.8e-32 142.1 98 68.4
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.8e-32 142.1 98 68.4
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.8e-32 142.1 98 68.4
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 3.6e-32 141.7 105 64.8
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.8e-31 139.4 77 79.2
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 3.0e-31 138.7 101 64.4
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.5e-30 136.3 77 79.2
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 3.4e-30 135.2 75 78.7
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 5.7e-30 134.4 63 88.9
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 5.7e-30 134.4 63 88.9
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.9e-29 132.1 102 61.8
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 4.9e-29 131.3 63 85.7
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 4.1e-28 128.3 77 76.6
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.2e-27 126.7 94 61.7
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.3e-26 123.2 78 74.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 5.0e-26 121.3 76 72.4
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 5.0e-26 121.3 76 72.4
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 8.6e-26 120.6 84 67.9
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 9.5e-25 117.1 76 72.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.1e-24 115.9 84 66.7
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.8e-24 115.5 76 65.8
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 3.1e-23 112.1 79 65.8
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 9.8e-22 107.1 52 82.7
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 3.7e-21 105.1 90 61.1
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 4.9e-21 104.8 122 48.4
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 4.9e-21 104.8 103 55.3
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.9e-20 102.8 46 93.5
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 7.0e-20 100.9 62 69.4
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.2e-19 100.1 84 60.7
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 2.7e-19 99.0 45 93.3
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.7e-18 96.3 122 45.1
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 3.3e-17 92.0 46 84.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 9.5e-17 90.5 63 66.7
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.1e-16 89.4 66 63.6
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.1e-16 89.4 85 51.8
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 3.6e-16 88.6 101 47.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 3.6e-16 88.6 47 80.9
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 4.7e-16 88.2 63 65.1
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.2e-14 83.6 63 60.3
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.0e-14 82.8 55 67.3
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.8e-14 81.3 55 65.5
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 4.1e-12 75.1 79 49.4
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 8.1e-08 60.8 30 80.0


User provided reference genes

Program Settings