Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 2.9e-182 641.7 314 100.0
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-149 533.5 405 72.3
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 3.0e-147 525.4 402 71.1
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 4.8e-145 518.1 402 71.9
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 5.9e-127 458.0 391 64.2
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 3.8e-126 455.3 391 63.7
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 6.8e-115 417.9 396 60.9
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 4.4e-114 415.2 400 60.0
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 8.0e-92 341.3 306 65.7
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-62 243.8 240 60.0
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-58 231.1 365 43.0
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.3e-53 212.6 395 38.0
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 4.5e-50 202.6 182 61.0
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-49 200.3 399 36.8
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 4.9e-49 199.1 375 38.4
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 9.3e-48 194.9 379 37.7
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.2e-47 194.5 401 37.2
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 6.0e-47 192.2 123 79.7
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.0e-43 179.5 406 36.0
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.9e-43 178.7 291 43.6
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 2.9e-41 173.3 404 33.2
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.1e-39 167.2 297 40.1
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 2.1e-39 167.2 287 39.4
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 2.1e-39 167.2 350 33.7
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 2.7e-39 166.8 380 33.9
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.5e-39 166.4 395 34.2
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 6.0e-39 165.6 366 33.6
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.8e-38 164.1 367 33.2
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.0e-38 163.3 314 38.2
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-37 161.0 344 38.1
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.5e-37 160.2 357 35.9
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.3e-37 159.5 297 37.0
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-36 157.9 386 34.5
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 1.4e-35 154.5 381 32.5
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-35 154.1 392 33.2
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 4.1e-35 152.9 312 34.0
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 1.5e-34 151.0 337 36.5
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 1.5e-34 151.0 337 36.5
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.5e-34 151.0 366 35.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 2.6e-34 150.2 372 32.8
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 3.4e-34 149.8 343 35.6
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 4.5e-34 149.4 343 35.3
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 7.6e-34 148.7 373 32.2
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-33 146.7 194 46.4
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 7.2e-32 142.1 343 32.9
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 7.2e-32 142.1 343 32.9
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 9.3e-32 141.7 348 32.8
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.6e-31 141.0 320 34.7
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.1e-31 140.6 343 33.5
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.1e-31 139.0 298 35.6
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 7.9e-31 138.7 263 38.0
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 7.9e-31 138.7 317 34.1
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 3.0e-30 136.7 340 32.1
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.1e-30 136.0 269 37.9
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 6.7e-30 135.6 343 32.4
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 8.7e-30 135.2 340 31.8
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 3.3e-29 133.3 284 38.0
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 2.8e-28 130.2 343 31.2
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 2.4e-27 127.1 343 32.1
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 5.3e-27 125.9 352 31.8
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 6.9e-27 125.6 274 36.5
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 1.2e-26 124.8 317 31.5
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.0e-26 124.0 375 27.7
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.6e-26 123.6 251 36.7
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.7e-25 120.9 349 28.1
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 8.5e-25 118.6 160 44.4
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 3.2e-24 116.7 190 37.4
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 7.9e-23 112.1 180 43.3
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 1.4e-22 111.3 63 88.9
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-22 110.9 196 38.8
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.3e-22 110.5 310 30.6
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.8e-22 108.6 251 35.1
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-21 108.2 317 30.9
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.5e-21 107.8 325 29.5
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.2e-20 102.1 240 32.9
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.4e-19 101.3 263 33.1
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.4e-18 96.7 180 42.2
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.3e-17 94.7 312 27.6
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.8e-17 93.2 160 36.9
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 6.1e-15 85.9 96 43.8
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.7e-12 76.6 163 29.4
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.4e-11 74.7 114 41.2
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.1e-11 73.6 42 83.3
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 4.1e-11 73.2 112 43.8
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 1.2e-10 71.6 321 28.3
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 5.5e-08 62.8 100 35.0
AL1G33800 Arabidopsis lyrata HOM05D013746 ORTHO05D015945 7.2e-08 62.4 45 66.7
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 1.2e-07 61.6 241 27.8
AT1G20803 Arabidopsis thaliana HOM05D013746 ORTHO05D015945 2.7e-07 60.5 42 66.7
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 8.0e-07 58.9 147 35.4
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 8.0e-07 58.9 140 27.1
BcaC01g05840 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-06 57.8 93 36.6
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 2.3e-06 57.4 163 30.1
A08p29240 Brassica napus HOM05D013746 ORTHO05D015945 8.8e-06 55.5 41 61.0
BraA08t34859Z Brassica rapa HOM05D013746 ORTHO05D015945 8.8e-06 55.5 41 61.0
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 8.8e-06 55.5 231 23.4


User provided reference genes

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