Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38949 Brassica carinata HOM05D010051 ORTHO05D002430 4.7e-109 397.9 203 100.0
BcaB03g12954 Brassica carinata HOM05D010051 ORTHO05D002430 5.9e-96 354.4 197 93.4
BraA08t34952Z Brassica rapa HOM05D010051 ORTHO05D002430 4.0e-84 315.1 197 83.2
BcaC07g38950 Brassica carinata HOM05D010051 ORTHO05D002430 4.4e-83 311.6 199 82.4
C08p18940 Brassica napus HOM05D010051 ORTHO05D002430 4.4e-83 311.6 199 82.4
A08p30180 Brassica napus HOM05D010051 ORTHO05D002430 5.8e-83 311.2 197 82.7
BolC8t49520H Brassica oleracea HOM05D010051 ORTHO05D002430 2.0e-80 302.8 197 80.2
Sp1g16790 Schrenkiella parvula HOM05D010051 ORTHO05D002430 1.1e-78 297.0 211 76.3
Thhalv10007914m.g Eutrema salsugineum HOM05D010051 ORTHO05D002430 3.0e-71 272.3 214 72.0
AL1G31320 Arabidopsis lyrata HOM05D010051 ORTHO05D002430 1.5e-70 270.0 210 73.8
Carub.0001s1845 Capsella rubella HOM05D010051 ORTHO05D002430 1.4e-68 263.5 212 70.3
CARHR019460 Cardamine hirsuta HOM05D010051 ORTHO05D002430 1.2e-67 260.4 193 75.1
BcaB07g31896 Brassica carinata HOM05D010051 ORTHO05D002430 1.5e-67 260.0 192 74.5
AT1G18810 Arabidopsis thaliana HOM05D010051 ORTHO05D002430 4.0e-60 235.3 201 68.2
BcaC05g25779 Brassica carinata HOM05D010051 ORTHO05D002430 1.4e-57 226.9 192 67.2
Aa31LG7G3590 Aethionema arabicum HOM05D010051 ORTHO05D002430 2.7e-40 169.5 197 54.8
C05p17210 Brassica napus HOM05D010051 ORTHO05D002430 1.1e-30 137.5 128 64.1
BolC5t30421H Brassica oleracea HOM05D010051 ORTHO05D002430 1.1e-30 137.5 128 64.1
THA.LOC104812550 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 5.0e-26 122.1 192 47.4
BcaB07g32213 Brassica carinata HOM05D010051 ORTHO05D002430 1.6e-21 107.1 74 74.3
BcaB07g32219 Brassica carinata HOM05D010051 ORTHO05D002430 1.6e-21 107.1 74 74.3
BcaB06g26411 Brassica carinata HOM05D010051 ORTHO05D002430 1.2e-19 100.9 70 72.9
MD06G1192200 Malus domestica HOM05D002654 ORTHO05D002430 8.5e-10 68.2 135 37.8
A06p15020 Brassica napus HOM05D010051 ORTHO05D002430 1.4e-09 67.4 68 61.8
MD14G1198800 Malus domestica HOM05D002654 ORTHO05D002430 4.2e-09 65.9 135 37.8
PGR142G0432 Punica granatum HOM05D002654 ORTHO05D002430 6.1e-08 62.0 139 33.1
FAN04G1767 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.8e-07 60.5 146 33.6
Actinidia04902 Actinidia chinensis HOM05D000001 ORTHO05D009295 2.3e-07 60.1 155 33.5
FAN08G1738 Fragaria x ananassa HOM05D002654 ORTHO05D002430 3.0e-07 59.7 146 33.6
Sopen06g027150 Solanum pennellii HOM05D002654 ORTHO05D002430 3.9e-07 59.3 119 34.5
Duzib205G1664 Durio zibethinus HOM05D002654 ORTHO05D002430 5.1e-07 58.9 131 36.6
Prupe.5G191900 Prunus persica HOM05D002654 ORTHO05D002430 5.1e-07 58.9 158 34.2
Sabra15G0087900 Salix brachista HOM05D002654 ORTHO05D002430 5.1e-07 58.9 172 34.9
Actinidia37635 Actinidia chinensis HOM05D002654 ORTHO05D002430 6.7e-07 58.5 118 35.6
Duzib084G1162 Durio zibethinus HOM05D002654 ORTHO05D002430 6.7e-07 58.5 148 30.4
FvH4_5g15090 Fragaria vesca HOM05D002654 ORTHO05D002430 6.7e-07 58.5 179 29.6
FAN18G2581 Fragaria x ananassa HOM05D002654 ORTHO05D002430 6.7e-07 58.5 179 29.6
PSO339G6607 Papaver somniferum HOM05D002654 ORTHO05D002430 6.7e-07 58.5 195 30.3
FAN13G3070 Fragaria x ananassa HOM05D002654 ORTHO05D002430 8.8e-07 58.2 146 32.9
COL.COLO4_24533 Corchorus olitorius HOM05D002654 ORTHO05D002430 1.1e-06 57.8 205 28.3
Dinv19955 Davidia involucrata HOM05D000087 ORTHO05D000439 1.1e-06 57.8 145 34.5
Thhalv10004196m.g Eutrema salsugineum HOM05D002654 ORTHO05D002430 2.0e-06 57.0 153 32.7
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 2.0e-06 57.0 120 39.2
Ciclev10020017m.g Citrus clementina HOM05D002654 ORTHO05D002430 2.6e-06 56.6 178 33.1
Lsat_1_v5_gn_8_53121 Lactuca sativa HOM05D002654 ORTHO05D002430 2.6e-06 56.6 161 33.5
Manes.06G093600 Manihot esculenta HOM05D002654 ORTHO05D002430 3.3e-06 56.2 136 35.3
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 4.4e-06 55.8 126 38.1
Sed0007158 Sechium edule HOM05D002654 ORTHO05D002430 4.4e-06 55.8 160 33.8
Cpa.g.sc111.2 Carica papaya HOM05D002654 ORTHO05D002430 5.7e-06 55.5 200 30.0
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 5.7e-06 55.5 142 34.5
Gohir.D07G068400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 7.4e-06 55.1 125 35.2
Gorai.001G071900 Gossypium raimondii HOM05D002654 ORTHO05D002430 7.4e-06 55.1 125 35.2
CSS0037456 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 9.7e-06 54.7 137 29.9
Solyc06g069880.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 9.7e-06 54.7 119 32.8
Thecc.03G084900 Theobroma cacao HOM05D002654 ORTHO05D002430 9.7e-06 54.7 132 34.8


User provided reference genes

Program Settings