Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 5.3e-133 477.6 232 100.0
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 2.1e-129 465.7 232 97.4
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 2.1e-129 465.7 232 97.4
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 2.7e-121 438.7 225 94.2
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 1.4e-120 436.4 225 93.8
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 5.7e-111 404.4 233 85.0
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 1.6e-108 396.4 229 83.0
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 2.0e-108 396.0 234 82.5
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 4.5e-108 394.8 233 81.1
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 5.9e-108 394.4 234 82.1
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 2.9e-107 392.1 232 81.5
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 6.5e-107 391.0 232 81.5
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 1.5e-106 389.8 233 79.8
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 4.2e-106 388.3 235 81.7
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 2.7e-105 385.6 236 79.2
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 1.0e-104 383.6 233 79.8
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 7.5e-103 377.5 234 79.1
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 4.8e-102 374.8 232 76.7
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 1.1e-101 373.6 233 76.0
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 2.0e-100 369.4 254 72.0
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 4.5e-100 368.2 232 76.3
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 4.7e-97 358.2 232 73.3
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 1.2e-95 353.6 248 75.0
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 2.3e-88 329.3 230 67.8
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 2.0e-84 316.2 214 69.2
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 2.7e-84 315.8 231 64.9
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 5.2e-72 275.0 232 55.2
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 1.7e-70 270.0 210 58.6
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 1.9e-69 266.5 209 56.0
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 7.1e-69 264.6 214 53.3
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 1.6e-68 263.5 199 57.3
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 3.5e-68 262.3 204 56.9
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 7.8e-68 261.2 200 58.5
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 7.8e-68 261.2 228 55.7
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 1.0e-67 260.8 222 54.5
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 1.0e-67 260.8 196 59.7
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.3e-67 260.4 222 54.1
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 1.7e-67 260.0 225 56.0
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 3.0e-67 259.2 211 55.0
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 3.0e-67 259.2 203 57.1
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 8.6e-67 257.7 229 55.0
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 1.1e-66 257.3 221 56.6
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 1.9e-66 256.5 228 52.6
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 3.3e-66 255.8 196 61.2
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 4.3e-66 255.4 201 55.7
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 7.3e-66 254.6 210 57.6
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 9.5e-66 254.2 221 56.1
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 1.6e-65 253.4 199 61.3
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 3.6e-65 252.3 223 56.1
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 4.7e-65 251.9 205 56.1
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 4.7e-65 251.9 209 55.0
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 4.7e-65 251.9 216 54.6
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 6.2e-65 251.5 208 54.8
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 6.2e-65 251.5 207 54.1
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 3.1e-64 249.2 221 55.7
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 5.2e-64 248.4 194 57.7
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 8.9e-64 247.7 209 52.2
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 8.9e-64 247.7 231 49.4
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 2.0e-63 246.5 231 53.2
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 2.6e-63 246.1 216 52.8
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 3.4e-63 245.7 204 57.8
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 3.4e-63 245.7 205 52.2
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 1.3e-62 243.8 196 55.6
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 1.7e-62 243.4 215 53.0
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 4.9e-62 241.9 193 57.5
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 4.9e-62 241.9 222 48.6
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 4.9e-62 241.9 204 53.9
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 4.9e-62 241.9 216 52.8
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 1.4e-61 240.4 210 53.8
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 1.4e-61 240.4 196 56.6
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 3.2e-61 239.2 205 52.7
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 5.4e-61 238.4 210 52.9
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 5.4e-61 238.4 198 53.5
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 7.1e-61 238.0 196 55.6
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 1.6e-60 236.9 209 50.7
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 7.8e-60 234.6 210 51.4
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 1.7e-59 233.4 204 51.5
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 2.3e-59 233.0 202 52.0
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 5.1e-59 231.9 216 49.5
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 5.1e-59 231.9 210 51.4
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 6.6e-59 231.5 210 51.9
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 6.6e-59 231.5 224 49.6
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 8.7e-59 231.1 228 47.4
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 1.1e-58 230.7 193 57.5
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.3e-58 229.2 212 49.5
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 4.3e-58 228.8 223 47.1
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 4.3e-58 228.8 195 53.3
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 4.3e-58 228.8 210 51.0
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 5.6e-58 228.4 203 52.7
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 7.3e-58 228.0 174 56.9
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 2.1e-57 226.5 189 57.1
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 2.8e-57 226.1 218 50.5
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 2.8e-57 226.1 224 44.6
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 3.6e-57 225.7 224 44.6
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 1.1e-56 224.2 224 44.6
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 5.2e-56 221.9 181 59.1
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 3.4e-55 219.2 234 46.2
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 9.9e-55 217.6 207 49.3
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 1.7e-54 216.9 192 52.6
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 3.8e-54 215.7 224 43.3
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.8e-54 215.7 187 52.4
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 8.4e-54 214.5 193 53.4
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 9.3e-53 211.1 207 47.8
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 1.6e-52 210.3 187 47.6
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 6.0e-52 208.4 229 46.7
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 2.3e-51 206.5 167 52.7
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 8.7e-51 204.5 189 50.3
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 1.9e-50 203.4 210 47.1
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 2.8e-49 199.5 177 55.4
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 3.6e-49 199.1 219 49.8
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 4.0e-48 195.7 181 51.9
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 9.0e-48 194.5 175 49.1
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 9.0e-48 194.5 180 47.2
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 9.0e-48 194.5 196 46.9
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 9.9e-47 191.0 203 47.8
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 2.2e-46 189.9 233 44.2
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 1.9e-45 186.8 158 55.1
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 7.9e-44 181.4 201 44.8
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 6.7e-43 178.3 116 63.8
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 4.3e-42 175.6 198 43.4
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 4.0e-40 169.1 211 39.3
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 6.9e-40 168.3 204 42.6
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 6.9e-40 168.3 254 37.0
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 9.0e-40 167.9 247 41.7
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 2.6e-39 166.4 190 45.3
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 1.9e-37 160.2 114 62.3
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 1.9e-37 160.2 106 65.1
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 7.1e-37 158.3 185 40.0
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 2.3e-35 153.3 136 57.4
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 2.8e-33 146.4 135 48.1
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 2.5e-26 123.2 67 85.1
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 6.3e-25 118.6 107 51.4
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 5.9e-23 112.1 137 41.6
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 1.1e-21 107.8 53 86.8
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 6.1e-20 102.1 80 50.0
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.8e-17 93.2 67 52.2
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 6.9e-16 88.6 61 54.1
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 3.4e-15 86.3 92 45.7
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 4.5e-15 85.9 59 59.3
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 7.7e-15 85.1 56 60.7
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 8.5e-14 81.6 95 50.5
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.2e-12 77.8 82 52.4
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 2.1e-12 77.0 52 67.3
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 3.6e-12 76.3 99 43.4
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.0e-11 74.7 76 47.4
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 3.9e-11 72.8 49 61.2
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 3.9e-11 72.8 153 30.7
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 8.8e-11 71.6 51 64.7
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 4.8e-09 65.9 154 28.6
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 2.0e-07 60.5 61 45.9
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 2.9e-06 56.6 76 46.1


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