Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 8.5e-79 297.0 153 100.0
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 3.3e-75 285.0 152 96.7
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.3e-75 285.0 152 96.1
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 3.7e-74 281.6 152 95.4
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-72 276.6 151 94.0
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-72 276.2 152 94.1
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.0e-72 275.8 152 94.1
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.0e-71 273.5 150 94.0
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.3e-71 273.1 147 95.9
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 3.8e-71 271.6 148 93.9
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-70 269.2 145 95.9
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-70 269.2 151 91.4
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-70 269.2 152 91.4
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-70 268.9 151 92.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 5.5e-70 267.7 151 91.4
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 7.2e-70 267.3 147 93.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 7.2e-70 267.3 148 93.9
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.6e-69 265.0 146 94.5
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 5.1e-68 261.2 152 90.1
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-66 255.8 148 89.9
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 4.8e-66 254.6 145 91.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.4e-65 253.1 151 87.4
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.9e-63 245.4 137 93.4
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-62 242.3 152 85.5
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 2.1e-61 239.2 149 85.2
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 9.7e-59 230.3 143 87.4
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-58 228.8 143 83.9
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-58 228.4 148 81.8
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 6.3e-58 227.6 145 85.5
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-57 226.5 143 83.2
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.7e-55 219.5 143 80.4
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.2e-55 219.2 150 80.7
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.5e-54 216.5 117 97.4
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 4.7e-53 211.5 118 94.9
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.7e-53 211.5 118 94.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 6.1e-53 211.1 143 81.1
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-52 209.1 118 93.2
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 5.2e-52 208.0 143 79.7
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.5e-51 206.5 111 96.4
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-51 206.5 131 86.3
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 2.2e-50 202.6 155 74.2
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 9.1e-49 197.2 141 79.4
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.0e-48 196.1 112 92.0
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.1e-45 186.0 136 73.5
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-42 176.8 128 75.8
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.8e-41 172.9 138 74.6
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.6e-40 169.9 126 73.0
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-39 166.0 121 77.7
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 9.5e-38 160.6 120 73.3
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 3.6e-37 158.7 116 75.9
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 6.1e-37 157.9 153 62.7
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.0e-36 155.6 141 67.4
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.5e-35 153.3 125 67.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.3e-34 150.2 128 65.6
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.7e-34 149.8 111 71.2
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 1.7e-34 149.8 120 70.0
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 2.2e-34 149.4 125 65.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 2.9e-34 149.1 111 71.2
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 3.7e-34 148.7 111 71.2
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 7.0e-33 144.4 107 73.8
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 7.8e-32 141.0 111 68.5
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 8.6e-31 137.5 80 90.0
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 1.5e-30 136.7 94 77.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 7.3e-30 134.4 154 53.9
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.4e-28 130.2 85 81.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-28 129.4 99 75.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 8.9e-28 127.5 70 92.9
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 9.8e-27 124.0 113 65.5
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 2.2e-26 122.9 106 69.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-26 122.9 94 72.3
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 4.9e-26 121.7 148 52.7
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-25 120.2 115 65.2
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 2.4e-25 119.4 98 66.3
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 2.4e-25 119.4 121 62.0
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 4.1e-25 118.6 84 72.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.2e-24 117.1 83 73.5
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.6e-24 116.7 113 61.9
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 4.6e-24 115.2 147 51.0
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 7.8e-24 114.4 113 61.9
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.3e-23 113.6 85 77.6
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 7.3e-22 107.8 118 62.7
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 4.7e-21 105.1 74 73.0
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.3e-20 102.8 90 67.8
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 3.1e-20 102.4 66 83.3
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.7e-18 96.7 140 45.7
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 2.9e-18 95.9 93 62.4
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 4.9e-18 95.1 68 69.1
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.9e-17 93.2 83 63.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.2e-16 90.5 85 62.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 2.7e-16 89.4 111 53.2
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.3e-15 86.3 94 59.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 3.0e-15 85.9 109 46.8
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 5.6e-14 81.6 107 44.9
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.2e-13 80.5 84 54.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.6e-13 80.1 148 42.6
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 2.1e-13 79.7 95 52.6
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.8e-13 79.3 140 45.7
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 2.8e-13 79.3 107 45.8
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.8e-13 79.3 81 53.1
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.8e-13 79.3 107 45.8
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 8.1e-13 77.8 149 43.0
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 1.1e-12 77.4 40 95.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 1.4e-12 77.0 107 44.9
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.2e-11 73.9 107 45.8
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 3.4e-11 72.4 43 86.0
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 7.6e-11 71.2 113 46.9
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 9.9e-11 70.9 108 47.2
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 2.9e-10 69.3 73 50.7
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 4.9e-10 68.6 154 39.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 8.4e-10 67.8 104 42.3
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.4e-09 67.0 107 43.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.4e-09 67.0 136 36.8
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 3.2e-09 65.9 85 47.1
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.2e-09 65.9 83 50.6
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 4.1e-09 65.5 98 44.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 5.4e-09 65.1 83 49.4
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 9.2e-09 64.3 73 58.9
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 2.1e-08 63.2 99 44.4
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.7e-07 60.1 77 50.6
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.5e-06 57.0 145 32.4
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 3.3e-06 55.8 72 45.8
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 7.3e-06 54.7 40 75.0


User provided reference genes

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