Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38611 Brassica carinata HOM05D008743 ORTHO05D000950 8.6e-64 246.9 131 100.0
BcaC07g38610 Brassica carinata HOM05D002303 ORTHO05D000950 6.8e-61 237.3 129 96.9
BolC8t49016H Brassica oleracea HOM05D008743 ORTHO05D000950 1.2e-54 216.5 131 87.8
A08p33890 Brassica napus HOM05D008743 ORTHO05D000950 1.6e-54 216.1 131 87.8
BraA08t35303Z Brassica rapa HOM05D008743 ORTHO05D000950 1.6e-54 216.1 131 87.8
C08p13810 Brassica napus HOM05D008743 ORTHO05D000950 2.8e-54 215.3 131 87.0
A09p64980 Brassica napus HOM05D008743 ORTHO05D000950 7.1e-50 200.7 131 80.9
BcaC07g38575 Brassica carinata HOM05D008743 ORTHO05D000950 2.1e-49 199.1 118 89.8
BcaC07g41813 Brassica carinata HOM05D008743 ORTHO05D000950 2.1e-49 199.1 131 80.2
C08p48750 Brassica napus HOM05D008743 ORTHO05D000950 2.1e-49 199.1 131 80.2
BolC8t52415H Brassica oleracea HOM05D008743 ORTHO05D000950 2.1e-49 199.1 131 80.2
BraA09t41841Z Brassica rapa HOM05D008743 ORTHO05D000950 2.7e-49 198.7 131 80.2
BcaB08g37360 Brassica carinata HOM05D008743 ORTHO05D000950 2.3e-48 195.7 131 77.9
BcaB08g37361 Brassica carinata HOM05D008743 ORTHO05D000950 2.3e-48 195.7 131 77.9
Sp1g09250 Schrenkiella parvula HOM05D008743 ORTHO05D000950 3.6e-46 188.3 132 78.0
A06p07380 Brassica napus HOM05D008743 ORTHO05D000950 1.2e-41 173.3 131 73.3
BraA06t23942Z Brassica rapa HOM05D008743 ORTHO05D000950 1.2e-41 173.3 131 73.3
BolC5t29635H Brassica oleracea HOM05D008743 ORTHO05D000950 4.6e-41 171.4 132 72.7
BcaC05g24945 Brassica carinata HOM05D008743 ORTHO05D000950 1.3e-40 169.9 132 73.5
C05p08870 Brassica napus HOM05D008743 ORTHO05D000950 1.3e-40 169.9 132 72.0
BcaB08g37362 Brassica carinata HOM05D008743 ORTHO05D000950 6.6e-40 167.5 131 69.5
AT1G10585 Arabidopsis thaliana HOM05D008743 ORTHO05D000950 1.9e-39 166.0 131 71.8
C05p08860 Brassica napus HOM05D008743 ORTHO05D000950 2.5e-39 165.6 131 71.0
AL1G21410 Arabidopsis lyrata HOM05D008743 ORTHO05D000950 5.6e-39 164.5 130 72.3
AT1G10586 Arabidopsis thaliana HOM05D008743 ORTHO05D000950 8.1e-38 160.6 130 71.5
AL1G21404 Arabidopsis lyrata HOM05D008743 ORTHO05D000950 1.4e-37 159.8 140 66.4
C08p48740 Brassica napus HOM05D008743 ORTHO05D000950 5.3e-37 157.9 133 66.9
BolC5t29634H Brassica oleracea HOM05D008743 ORTHO05D000950 5.3e-37 157.9 131 67.9
BraA09t41840Z Brassica rapa HOM05D008743 ORTHO05D000950 6.9e-37 157.5 133 65.4
BolC8t52413H Brassica oleracea HOM05D008743 ORTHO05D000950 9.0e-37 157.1 133 66.9
A09p64970 Brassica napus HOM05D008743 ORTHO05D000950 1.5e-36 156.4 133 66.2
Carub.0001s1004 Capsella rubella HOM05D008743 ORTHO05D000950 5.8e-36 154.5 130 68.5
BcaC05g24863 Brassica carinata HOM05D008743 ORTHO05D000950 1.3e-35 153.3 119 72.3
BcaC05g24864 Brassica carinata HOM05D008743 ORTHO05D000950 1.3e-35 153.3 119 72.3
Carub.0001s1003 Capsella rubella HOM05D008743 ORTHO05D000950 3.2e-34 148.7 132 64.4
BcaC05g24946 Brassica carinata HOM05D008743 ORTHO05D000950 2.7e-33 145.6 119 68.9
CARHR010750 Cardamine hirsuta HOM05D008743 ORTHO05D000950 2.7e-33 145.6 131 61.8
BcaC07g41812 Brassica carinata HOM05D008743 ORTHO05D000950 8.7e-32 140.6 120 67.5
Thhalv10009819m.g Eutrema salsugineum HOM05D008743 ORTHO05D000950 2.1e-30 136.0 131 60.3
A06p07390 Brassica napus HOM05D008743 ORTHO05D000950 2.9e-19 99.0 71 73.2
BraA06t23943Z Brassica rapa HOM05D008743 ORTHO05D000950 2.9e-19 99.0 71 73.2
THA.LOC104816774 Tarenaya hassleriana HOM05D008743 ORTHO05D000950 1.9e-18 96.3 131 42.0
Dinv27986 Davidia involucrata HOM05D001277 ORTHO05D000950 1.8e-16 89.7 126 39.7
BolC8t48981H Brassica oleracea HOM05D008743 ORTHO05D000950 3.0e-16 89.0 60 81.7
Dinv27918 Davidia involucrata HOM05D001277 ORTHO05D000950 2.8e-14 82.4 128 38.3
Dinv15296 Davidia involucrata HOM05D001277 ORTHO05D000950 4.8e-14 81.6 131 35.9
Dinv24856 Davidia involucrata HOM05D001277 ORTHO05D000950 3.1e-13 79.0 131 36.6
Atru.chr3.2847 Acer truncatum HOM05D001277 ORTHO05D000950 4.1e-13 78.6 135 37.0
Atru.chr11.2024 Acer truncatum HOM05D001277 ORTHO05D000950 1.5e-12 76.6 133 36.8
Dinv24853 Davidia involucrata HOM05D001277 ORTHO05D000950 1.5e-12 76.6 127 37.8
Dinv24857 Davidia involucrata HOM05D001277 ORTHO05D000950 2.0e-12 76.3 126 34.9
Eucgr.B00366 Eucalyptus grandis HOM05D001277 ORTHO05D000950 3.4e-12 75.5 139 32.4
Dinv24854 Davidia involucrata HOM05D001277 ORTHO05D000950 5.9e-12 74.7 126 35.7
Manes.12G028900 Manihot esculenta HOM05D001277 ORTHO05D000950 5.9e-12 74.7 129 35.7
Cpa.g.sc69.31 Carica papaya HOM05D001277 ORTHO05D000950 7.6e-12 74.3 131 35.9
Ciclev10018120m.g Citrus clementina HOM05D001277 ORTHO05D000950 2.9e-11 72.4 131 31.3
Dinv15297 Davidia involucrata HOM05D001277 ORTHO05D000950 3.8e-11 72.0 133 36.1
Ah.02g110450 Amaranthus hybridus HOM05D001277 ORTHO05D000950 5.0e-11 71.6 123 33.3
Cpa.g.sc69.33 Carica papaya HOM05D001277 ORTHO05D000950 6.5e-11 71.2 131 35.1
Dinv15299 Davidia involucrata HOM05D001277 ORTHO05D000950 1.1e-10 70.5 127 37.0
Glyma.05G036800 Glycine max HOM05D001277 ORTHO05D000950 1.1e-10 70.5 128 32.8
TWI36G0964 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 1.4e-10 70.1 139 33.1
TWI36G1746 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 1.9e-10 69.7 137 33.6
TWI36G0357 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 5.5e-10 68.2 137 33.6
COL.COLO4_36774 Corchorus olitorius HOM05D001277 ORTHO05D000950 1.2e-09 67.0 128 32.0
Thecc.02G248700 Theobroma cacao HOM05D001277 ORTHO05D000950 1.2e-09 67.0 126 31.7
Thecc.02G248800 Theobroma cacao HOM05D001277 ORTHO05D000950 1.2e-09 67.0 129 33.3
Lj4g0004622 Lotus japonicus HOM05D001277 ORTHO05D000950 1.6e-09 66.6 127 32.3
BolC8t48978H Brassica oleracea HOM05D055781 ORTHO05D000950 2.7e-09 65.9 78 51.3
SalBow2G0128 Salvia bowleyana HOM05D001277 ORTHO05D000950 2.7e-09 65.9 130 31.5
Solyc03g114233.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 2.7e-09 65.9 124 33.1
CiPaw.11G028000 Carya illinoinensis HOM05D001277 ORTHO05D000950 3.5e-09 65.5 122 29.5
Nitab4.5_0003857g0010 Nicotiana tabacum HOM05D001277 ORTHO05D000950 3.5e-09 65.5 130 28.5
Hma1.2p1_2175F.1_g316090 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 4.6e-09 65.1 128 28.1
Nn3g16890 Nelumbo nucifera HOM05D001277 ORTHO05D000950 6.1e-09 64.7 128 32.8
TAR629G0294 Trochodendron aralioides HOM05D001277 ORTHO05D000950 6.1e-09 64.7 127 29.9
CSS0033336 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 7.9e-09 64.3 129 31.8
FAN18G4206 Fragaria x ananassa HOM05D001277 ORTHO05D000950 7.9e-09 64.3 139 30.2
Atru.chr3.2850 Acer truncatum HOM05D001277 ORTHO05D000950 1.0e-08 63.9 128 34.4
Lj3A1053G40 Lonicera japonica HOM05D001277 ORTHO05D000950 1.0e-08 63.9 85 40.0
Nitab4.5_0000852g0080 Nicotiana tabacum HOM05D001277 ORTHO05D000950 1.3e-08 63.5 130 31.5
Peaxi162Scf00017g02837 Petunia axillaris HOM05D001277 ORTHO05D000950 1.3e-08 63.5 129 32.6
SalBow2G2868 Salvia bowleyana HOM05D001277 ORTHO05D000950 1.3e-08 63.5 123 35.0
GSVIVG01007772001 Vitis vinifera HOM05D001277 ORTHO05D000950 1.3e-08 63.5 134 28.4
CSS0006867 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 1.8e-08 63.2 103 37.9
Ciclev10017617m.g Citrus clementina HOM05D001277 ORTHO05D000950 1.8e-08 63.2 127 30.7
Aqoxy3G01012 Aquilegia oxysepala HOM05D001277 ORTHO05D000950 2.3e-08 62.8 130 26.9
Ciclev10018141m.g Citrus clementina HOM05D001277 ORTHO05D000950 2.3e-08 62.8 131 27.5
DCAR_026126 Daucus carota HOM05D001277 ORTHO05D000950 2.3e-08 62.8 126 29.4
Duzib268G1467 Durio zibethinus HOM05D001277 ORTHO05D000950 2.3e-08 62.8 131 30.5
Lsat_1_v5_gn_8_157101 Lactuca sativa HOM05D001277 ORTHO05D000950 2.3e-08 62.8 130 30.0
TWI36G1270 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 2.3e-08 62.8 137 32.8
MSTRG.9675 Avicennia marina HOM05D001277 ORTHO05D000950 3.9e-08 62.0 129 34.1
Duzib248G0806 Durio zibethinus HOM05D001277 ORTHO05D000950 3.9e-08 62.0 124 29.0
Gohir.A04G135300 Gossypium hirsutum HOM05D001277 ORTHO05D000950 3.9e-08 62.0 131 30.5
Cc11_g14670 Coffea canephora HOM05D001277 ORTHO05D000950 5.1e-08 61.6 126 30.2
FAN04G0760 Fragaria x ananassa HOM05D001277 ORTHO05D000950 5.1e-08 61.6 139 29.5
Atru.chr9.2450 Acer truncatum HOM05D001277 ORTHO05D000950 6.7e-08 61.2 136 27.9
FvH4_5g05180 Fragaria vesca HOM05D001277 ORTHO05D000950 6.7e-08 61.2 139 29.5
FAN18G1626 Fragaria x ananassa HOM05D001277 ORTHO05D000950 6.7e-08 61.2 139 29.5
Hma1.2p1_0536F.1_g174130 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 6.7e-08 61.2 130 30.0
Nn3g16897 Nelumbo nucifera HOM05D001277 ORTHO05D000950 6.7e-08 61.2 128 28.9
FAN13G2787 Fragaria x ananassa HOM05D001277 ORTHO05D000950 8.7e-08 60.8 139 30.2
Prupe.5G175300 Prunus persica HOM05D001277 ORTHO05D000950 8.7e-08 60.8 130 29.2
TAR680G0004 Trochodendron aralioides HOM05D001277 ORTHO05D000950 8.7e-08 60.8 139 28.1
EL10Ac5g10771 Beta vulgaris HOM05D001277 ORTHO05D000950 1.1e-07 60.5 135 28.9
Gohir.D04G178400 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.1e-07 60.5 131 30.5
Solyc03g114230.2 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.1e-07 60.5 131 31.3
TAR622G0406 Trochodendron aralioides HOM05D001277 ORTHO05D000950 1.1e-07 60.5 133 29.3
COL.COLO4_36769 Corchorus olitorius HOM05D001277 ORTHO05D000950 1.9e-07 59.7 129 34.9
MBI10_g11074_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 1.9e-07 59.7 128 28.9
PGSC0003DMG400024597 Solanum tuberosum HOM05D001277 ORTHO05D000950 1.9e-07 59.7 131 29.0
Haze_07498 Corylus avellana HOM05D001277 ORTHO05D000950 2.5e-07 59.3 133 28.6
FAN08G2507 Fragaria x ananassa HOM05D001277 ORTHO05D000950 2.5e-07 59.3 139 28.8
RcHm_v2.0_Chr7g0193761 Rosa chinensis HOM05D001277 ORTHO05D000950 2.5e-07 59.3 138 29.0
Sopen03g033330 Solanum pennellii HOM05D001277 ORTHO05D000950 2.5e-07 59.3 131 30.5
Cpa.g.sc124.41 Carica papaya HOM05D001277 ORTHO05D000950 3.3e-07 58.9 130 29.2
CiPaw.11G027900 Carya illinoinensis HOM05D001277 ORTHO05D000950 3.3e-07 58.9 122 27.0
QL10p011975 Quercus lobata HOM05D001277 ORTHO05D000950 3.3e-07 58.9 126 28.6
Sabra15G0098400 Salix brachista HOM05D001277 ORTHO05D000950 3.3e-07 58.9 128 31.2
Sed0012989 Sechium edule HOM05D001277 ORTHO05D000950 3.3e-07 58.9 139 27.3
Cfa019101 Carpinus fangiana HOM05D001277 ORTHO05D000950 4.3e-07 58.5 125 31.2
Eucgr.K02851 Eucalyptus grandis HOM05D001277 ORTHO05D000950 4.3e-07 58.5 133 28.6
VMungo1309G3071 Vigna mungo HOM05D001277 ORTHO05D000950 4.3e-07 58.5 126 28.6
MELO3C002257.2 Cucumis melo HOM05D001277 ORTHO05D000950 5.7e-07 58.2 124 27.4
CiPaw.11G028100 Carya illinoinensis HOM05D001277 ORTHO05D000950 7.4e-07 57.8 123 27.6
Eucgr.K02855 Eucalyptus grandis HOM05D001277 ORTHO05D000950 7.4e-07 57.8 133 27.8
PGR083G0118 Punica granatum HOM05D001277 ORTHO05D000950 7.4e-07 57.8 131 26.7
VMungo1215G1091 Vigna mungo HOM05D001277 ORTHO05D000950 7.4e-07 57.8 127 29.1
Haze_07499 Corylus avellana HOM05D001277 ORTHO05D000950 9.7e-07 57.4 128 28.1
Glyma.U035800 Glycine max HOM05D001277 ORTHO05D000950 9.7e-07 57.4 127 29.9
MD14G1182700 Malus domestica HOM05D001277 ORTHO05D000950 9.7e-07 57.4 134 25.4
CSS0041963 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 1.3e-06 57.0 103 36.9
Potri.015G074500 Populus trichocarpa HOM05D001277 ORTHO05D000950 1.3e-06 57.0 127 28.3
Solyc03g114237.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.3e-06 57.0 131 30.5
HPP92_004859 Vanilla planifolia HOM05D001277 ORTHO05D000950 1.3e-06 57.0 126 24.6
Prupe.5G175200 Prunus persica HOM05D001277 ORTHO05D000950 1.6e-06 56.6 134 28.4
vmacro16602 Vaccinium macrocarpon HOM05D001277 ORTHO05D000950 1.6e-06 56.6 138 25.4
CSS0018561 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 2.2e-06 56.2 128 22.7
DCAR_010194 Daucus carota HOM05D001277 ORTHO05D000950 2.2e-06 56.2 126 26.2
Actinidia11081 Actinidia chinensis HOM05D001277 ORTHO05D000950 2.8e-06 55.8 131 29.0
EL10Ac5g10768 Beta vulgaris HOM05D001277 ORTHO05D000950 2.8e-06 55.8 128 29.7
Cfa019102 Carpinus fangiana HOM05D001277 ORTHO05D000950 2.8e-06 55.8 130 26.9
Potri.012G079100 Populus trichocarpa HOM05D001277 ORTHO05D000950 2.8e-06 55.8 128 28.9
ATR0737G008 Amborella trichopoda HOM05D001277 ORTHO05D000950 3.7e-06 55.5 129 27.1
CAN.G781.21 Capsicum annuum HOM05D001277 ORTHO05D000950 3.7e-06 55.5 130 29.2
CiPaw.12G025500 Carya illinoinensis HOM05D001277 ORTHO05D000950 3.7e-06 55.5 136 27.2
Eucgr.K02854 Eucalyptus grandis HOM05D001277 ORTHO05D000950 3.7e-06 55.5 133 27.1
Sabra12G0056700 Salix brachista HOM05D001277 ORTHO05D000950 3.7e-06 55.5 128 28.9
Actinidia33058 Actinidia chinensis HOM05D001277 ORTHO05D000950 4.8e-06 55.1 128 26.6
Duzib068G1427 Durio zibethinus HOM05D001277 ORTHO05D000950 4.8e-06 55.1 132 26.5
Nn3g16898 Nelumbo nucifera HOM05D001277 ORTHO05D000950 4.8e-06 55.1 127 28.3
Phvul.003G199500 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 6.3e-06 54.7 127 28.3
arahy.Tifrunner.gnm1.ann1.MB81X2 Arachis hypogaea HOM05D001277 ORTHO05D000950 8.2e-06 54.3 128 26.6
Manes.06G103800 Manihot esculenta HOM05D001277 ORTHO05D000950 8.2e-06 54.3 127 23.6


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