Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 1.9e-95 352.4 168 100.0
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 2.7e-94 348.6 168 99.4
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 7.3e-92 340.5 168 95.8
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 3.6e-91 338.2 168 95.8
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 3.6e-91 338.2 168 95.8
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 3.1e-90 335.1 168 94.6
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 7.6e-89 330.5 168 94.0
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 3.8e-88 328.2 168 93.5
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 7.4e-68 260.8 164 78.0
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 7.4e-68 260.8 164 78.0
BolC5t29583H Brassica oleracea HOM05D011270 ORTHO05D012905 6.3e-67 257.7 164 76.2
C05p08330 Brassica napus HOM05D011270 ORTHO05D012905 1.6e-62 243.0 155 75.5
Carub.0001s0960 Capsella rubella HOM05D011270 ORTHO05D012905 9.4e-55 217.2 167 66.5
CARHR010290 Cardamine hirsuta HOM05D011270 ORTHO05D012905 1.2e-54 216.9 169 66.3
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 4.3e-52 208.4 132 78.0
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 1.7e-51 206.5 138 77.5
C08p13460 Brassica napus HOM05D011270 ORTHO05D012905 4.1e-34 148.7 68 98.5
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 8.3e-11 71.2 171 33.3
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.1e-10 68.9 151 33.8
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 9.2e-10 67.8 94 44.7
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.7e-09 66.2 151 33.8
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.7e-09 66.2 151 33.1
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 3.5e-09 65.9 161 35.4
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 5.9e-09 65.1 97 40.2
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 7.8e-09 64.7 139 32.4
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 1.7e-08 63.5 155 30.3
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.3e-08 63.2 107 39.3
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.3e-08 63.2 142 36.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 5.0e-08 62.0 95 37.9
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.1e-07 60.8 155 34.8
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-07 60.8 160 32.5
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 2.5e-07 59.7 126 37.3
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.5e-07 59.7 162 31.5
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.5e-07 59.7 162 32.7
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.3e-07 59.3 153 34.0
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 4.3e-07 58.9 117 35.0
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 4.3e-07 58.9 154 31.2
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 5.6e-07 58.5 122 33.6
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.2e-06 57.4 159 34.6
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.1e-06 56.6 150 31.3
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.8e-06 56.2 142 32.4
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.8e-06 56.2 149 34.2
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 2.8e-06 56.2 154 31.8
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 2.8e-06 56.2 139 30.9
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 2.8e-06 56.2 108 37.0
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 3.6e-06 55.8 151 30.5
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 4.7e-06 55.5 156 34.0
Glyma.14G089087 Glycine max HOM05D014755 ORTHO05D005146 6.2e-06 55.1 104 37.5
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 6.2e-06 55.1 104 31.7


User provided reference genes

Program Settings