Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-120 436.8 265 100.0
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-89 333.2 268 74.6
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-86 323.2 268 73.9
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-83 312.8 268 66.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-79 299.7 268 69.8
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 8.9e-76 287.7 268 68.7
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 7.0e-73 278.1 207 77.3
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 9.5e-62 241.1 270 54.8
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 6.8e-60 235.0 259 61.0
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-59 233.0 270 60.0
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-58 228.4 266 61.3
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 6.6e-55 218.4 176 71.6
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-54 217.2 168 73.2
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-54 217.2 168 73.2
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-54 216.9 226 74.8
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-54 215.3 176 71.6
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-53 213.4 175 70.9
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-53 213.4 175 70.9
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-52 210.7 170 70.0
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 3.1e-52 209.5 171 69.6
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 2.0e-51 206.8 170 68.8
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-51 206.8 170 68.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-51 206.5 260 57.3
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-51 205.7 176 68.2
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-49 200.3 247 58.3
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 7.1e-49 198.4 250 55.6
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-46 189.9 167 65.9
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-46 188.7 166 66.9
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 9.6e-46 188.0 169 66.3
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 9.6e-46 188.0 169 66.3
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-45 187.6 178 64.6
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-45 186.0 152 70.4
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-44 183.3 155 69.0
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-43 179.1 143 72.0
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 7.6e-43 178.3 176 64.2
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-42 176.8 235 57.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 4.9e-42 175.6 173 63.0
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-41 173.3 176 63.1
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-41 173.3 176 63.1
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-41 172.9 173 61.8
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-41 172.9 173 61.8
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-40 169.9 125 76.0
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 2.7e-40 169.9 157 64.3
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 7.9e-40 168.3 165 62.4
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 7.9e-40 168.3 166 62.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-39 166.8 166 62.0
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 8.7e-39 164.9 143 67.8
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 3.3e-38 162.9 161 63.4
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 3.7e-37 159.5 122 71.3
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-37 159.5 172 58.1
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-37 159.5 181 62.4
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 6.9e-36 155.2 149 63.1
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 9.0e-36 154.8 263 42.2
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 9.0e-36 154.8 151 63.6
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-35 154.1 150 62.7
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 2.9e-34 149.8 148 63.5
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 3.8e-34 149.4 255 53.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.1e-33 147.9 112 72.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.1e-33 147.9 112 72.3
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.9e-33 147.1 299 36.8
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-33 147.1 117 70.9
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 6.0e-32 142.1 142 59.9
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.0e-31 141.4 183 50.8
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-31 139.4 138 61.6
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 6.7e-31 138.7 142 62.7
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 6.7e-31 138.7 135 63.0
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 8.7e-31 138.3 175 52.6
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-30 137.9 136 63.2
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.9e-30 137.1 149 59.1
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 3.3e-30 136.3 150 57.3
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 1.6e-29 134.0 135 60.7
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 4.8e-29 132.5 131 60.3
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-28 129.8 131 60.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-27 127.1 122 62.3
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 3.4e-27 126.3 73 86.3
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.3e-26 124.4 260 35.0
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-26 123.6 121 61.2
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-25 120.9 137 59.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 3.2e-25 119.8 233 41.2
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-25 119.8 115 60.9
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 4.2e-25 119.4 139 56.1
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 2.7e-24 116.7 239 37.7
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 7.9e-24 115.2 152 49.3
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-23 113.6 83 74.7
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-23 113.2 89 71.9
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-23 113.2 89 71.9
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 8.7e-23 111.7 147 55.1
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 1.5e-22 110.9 129 54.3
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 3.3e-22 109.8 123 54.5
C04p63340 Brassica napus HOM05D004489 ORTHO05D020025 3.3e-22 109.8 52 92.3
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 4.3e-22 109.4 162 44.4
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-22 109.4 89 70.8
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-21 107.8 80 73.8
C05p42590 Brassica napus HOM05D004489 ORTHO05D020025 3.7e-21 106.3 68 73.5
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-21 105.5 89 69.7
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 2.4e-20 103.6 148 47.3
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 3.1e-20 103.2 157 44.6
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 3.1e-20 103.2 126 51.6
BolC1t01194H Brassica oleracea HOM05D004489 ORTHO05D020025 5.3e-20 102.4 52 88.5
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 9.0e-20 101.7 80 72.5
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 3.4e-19 99.8 68 75.0
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 5.9e-19 99.0 60 88.3
C06p34160 Brassica napus HOM05D004489 ORTHO05D020025 5.9e-19 99.0 47 91.5
C04p48700 Brassica napus HOM05D001285 ORTHO05D000199 2.9e-18 96.7 53 79.2
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.9e-18 96.7 68 76.5
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 3.8e-18 96.3 119 50.4
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 3.8e-18 96.3 82 68.3
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 3.8e-18 96.3 156 46.2
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 5.0e-18 95.9 83 68.7
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 6.5e-18 95.5 145 46.2
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 6.5e-18 95.5 132 50.8
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.1e-17 94.7 68 75.0
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 1.9e-17 94.0 82 67.1
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-17 93.6 66 77.3
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 2.5e-17 93.6 83 67.5
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 2.1e-16 90.5 147 46.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 4.6e-16 89.4 148 43.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 7.9e-16 88.6 139 48.2
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 1.8e-15 87.4 192 40.6
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.8e-15 87.4 109 52.3
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 1.1e-14 84.7 136 44.1
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 1.5e-14 84.3 148 41.2
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 2.0e-14 84.0 190 38.9
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 5.7e-14 82.4 72 68.1
BraA01t02714Z Brassica rapa HOM05D004489 ORTHO05D020025 5.7e-14 82.4 53 67.9
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 9.7e-14 81.6 121 45.5
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 2.8e-13 80.1 118 48.3
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 3.7e-13 79.7 74 60.8
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 3.7e-13 79.7 166 33.1
C01p17930 Brassica napus HOM05D004489 ORTHO05D020025 8.2e-13 78.6 46 78.3
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 1.1e-12 78.2 166 33.7
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 1.1e-12 78.2 164 32.9
A04p09670 Brassica napus HOM05D008277 ORTHO05D016104 1.4e-12 77.8 166 32.5
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 4.1e-12 76.3 72 61.1
BcaB07g33271 Brassica carinata HOM05D004489 ORTHO05D020025 1.2e-11 74.7 53 58.5
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 1.5e-11 74.3 166 31.9
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 2.6e-11 73.6 79 54.4
BcaB08g35247 Brassica carinata HOM05D013484 ORTHO05D094577 1.7e-10 70.9 116 35.3
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-10 70.9 46 78.3
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 6.5e-10 68.9 90 51.1
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 1.9e-09 67.4 126 42.9
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-09 66.6 107 46.7
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 4.2e-09 66.2 83 61.4
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 4.2e-09 66.2 42 81.0
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 5.5e-09 65.9 75 52.0
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 9.4e-09 65.1 40 85.0
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 1.2e-08 64.7 78 52.6
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.4e-07 61.2 136 37.5
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 4.4e-06 56.2 43 51.2
BcaB03g13894 Brassica carinata HOM05D000076 ORTHO05D002949 7.4e-06 55.5 31 71.0


User provided reference genes

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