Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-183 646.0 389 100.0
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-112 408.7 254 92.1
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-110 401.7 256 90.6
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 8.4e-107 391.3 256 89.1
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-105 386.3 348 76.7
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 9.0e-101 371.3 255 85.9
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-99 365.5 255 84.7
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-98 364.0 237 86.1
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-98 364.0 348 73.9
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-97 359.8 234 84.6
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.0e-96 357.8 348 70.1
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-96 356.3 256 78.9
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.8e-94 349.7 348 69.3
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 2.8e-94 349.7 256 77.3
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-88 328.9 258 73.3
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 7.4e-87 325.1 258 72.9
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 1.8e-85 320.5 341 60.1
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-84 316.2 257 73.5
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-84 315.8 352 65.9
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.3e-83 314.3 352 62.2
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-83 313.5 255 71.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-83 313.5 256 70.7
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-82 310.8 256 70.3
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-82 310.5 258 70.5
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-81 306.6 221 77.8
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 3.5e-81 306.2 315 69.8
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-80 303.5 282 66.7
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-80 303.5 258 70.9
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-80 303.1 256 69.9
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 3.9e-80 302.8 355 65.9
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-80 302.4 256 69.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 4.1e-77 292.7 345 58.6
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 9.0e-77 291.6 256 69.5
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 9.0e-77 291.6 256 69.5
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 2.6e-76 290.0 337 59.6
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-75 287.0 194 82.0
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 8.5e-75 285.0 352 53.1
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.0e-72 278.1 316 60.1
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-72 276.6 173 92.5
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 8.8e-72 275.0 356 52.8
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-71 274.6 143 100.0
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-71 272.7 254 68.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 5.7e-71 272.3 340 56.5
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 9.7e-71 271.6 198 76.3
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-70 270.0 178 83.7
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-70 269.6 356 52.8
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-69 267.7 254 69.3
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-69 267.7 258 64.7
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-69 267.3 327 53.2
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-68 263.8 213 72.3
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 3.4e-68 263.1 345 54.5
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 7.7e-68 261.9 355 61.4
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 1.0e-67 261.5 262 63.7
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-67 260.8 205 72.2
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 2.7e-65 253.4 357 53.5
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-65 253.1 250 66.8
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.8e-64 250.8 179 77.7
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-63 247.7 186 75.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-63 246.9 205 69.3
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 3.3e-63 246.5 341 57.8
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 2.2e-62 243.8 345 51.3
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-62 242.3 213 88.3
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-61 240.4 143 90.2
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-60 237.3 143 88.8
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-59 234.2 205 67.8
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-59 234.2 134 93.3
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-57 228.0 128 92.2
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 1.5e-55 221.1 255 74.1
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 5.7e-55 219.2 256 55.9
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 8.2e-54 215.3 205 63.4
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-53 214.5 252 60.3
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-53 213.0 186 67.7
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 5.3e-53 212.6 174 73.6
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 5.3e-53 212.6 143 82.5
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 3.5e-52 209.9 252 55.6
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 2.2e-51 207.2 262 58.4
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 6.5e-51 205.7 177 73.4
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-50 203.8 142 79.6
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 6.1e-49 199.1 125 86.4
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 6.8e-48 195.7 262 66.4
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-47 193.0 298 46.3
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 3.7e-46 189.9 546 34.1
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 5.9e-44 182.6 102 94.1
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 3.8e-43 179.9 230 52.6
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 6.5e-43 179.1 133 75.9
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-42 177.9 156 67.3
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 2.5e-42 177.2 237 51.9
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 5.5e-42 176.0 191 57.6
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-41 174.9 173 63.0
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 2.2e-38 164.1 92 94.6
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 4.9e-38 162.9 246 50.4
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 8.3e-38 162.2 122 73.0
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-37 161.0 94 90.4
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 3.5e-36 156.8 438 42.2
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 3.8e-35 153.3 167 55.7
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 6.6e-35 152.5 370 39.5
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 8.6e-35 152.1 141 66.0
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 2.5e-34 150.6 139 65.5
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 3.3e-34 150.2 134 67.9
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 2.1e-33 147.5 194 51.0
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 2.1e-33 147.5 194 51.0
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 8.0e-33 145.6 139 62.6
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.2e-31 141.7 139 63.3
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.5e-31 141.4 251 45.0
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 2.6e-31 140.6 198 51.5
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 2.6e-31 140.6 249 44.6
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 1.7e-30 137.9 116 68.1
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 2.2e-30 137.5 298 49.3
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 1.8e-29 134.4 152 52.6
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 2.4e-29 134.0 142 89.4
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.0e-27 128.6 332 38.6
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 2.3e-27 127.5 123 63.4
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.9e-26 124.4 195 45.6
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 1.9e-26 124.4 121 62.0
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-26 122.1 74 86.5
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 1.2e-25 121.7 171 48.5
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.6e-25 121.3 244 43.9
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 2.8e-25 120.6 121 60.3
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 3.6e-25 120.2 142 84.5
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 4.7e-25 119.8 150 59.3
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 1.8e-24 117.9 217 40.6
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 1.5e-23 114.8 253 41.5
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 5.8e-23 112.8 214 40.2
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 9.8e-23 112.1 183 45.4
BcaC06g35012 Brassica carinata HOM05D004489 ORTHO05D021897 9.8e-23 112.1 158 52.5
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 2.4e-21 107.5 244 40.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 1.6e-20 104.8 251 38.6
C07p19330 Brassica napus HOM05D004489 ORTHO05D021897 1.7e-19 101.3 55 92.7
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 3.9e-19 100.1 200 40.0
BolC3t18662H Brassica oleracea HOM05D008277 ORTHO05D028234 1.9e-18 97.8 41 97.6
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 2.1e-17 94.4 78 70.5
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 8.1e-17 92.4 204 41.2
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 2.3e-16 90.9 260 35.4
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 2.3e-16 90.9 53 90.6
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 3.1e-16 90.5 54 87.0
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 6.8e-16 89.4 41 92.7
BolC8t47152H Brassica oleracea HOM05D008277 ORTHO05D028234 6.8e-16 89.4 39 94.9
A01p28050 Brassica napus HOM05D008277 ORTHO05D028234 1.2e-15 88.6 37 97.3
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.7e-14 84.7 89 56.2
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 2.9e-14 84.0 40 87.5
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 8.3e-14 82.4 245 44.1
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 1.4e-13 81.6 41 85.4
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 4.1e-13 80.1 40 85.0
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 1.6e-12 78.2 101 59.4
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 7.8e-12 75.9 164 45.7
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 3.0e-11 73.9 39 74.4
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 3.0e-11 73.9 39 74.4
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 1.1e-10 72.0 56 75.0
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 1.5e-10 71.6 39 71.8
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 2.5e-10 70.9 39 71.8
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 2.5e-10 70.9 39 71.8
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 3.3e-10 70.5 151 32.5
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 3.3e-10 70.5 112 44.6
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 4.3e-10 70.1 139 46.0
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 4.3e-10 70.1 39 71.8
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 2.1e-09 67.8 141 39.7
BraA01t02913Z Brassica rapa HOM05D004489 ORTHO05D021897 2.1e-09 67.8 222 32.0
BraA03t15298Z Brassica rapa HOM05D008277 ORTHO05D028234 2.8e-09 67.4 39 69.2
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 1.8e-08 64.7 123 43.9
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 1.8e-08 64.7 38 68.4
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 1.8e-08 64.7 123 43.9
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 4.0e-08 63.5 143 39.2
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 2.6e-07 60.8 130 40.0
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 2.9e-06 57.4 201 33.8
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 2.9e-06 57.4 116 42.2
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 3.7e-06 57.0 129 36.4
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 6.4e-06 56.2 129 35.7


User provided reference genes

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