Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 4.8e-30 134.0 78 100.0
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 1.9e-26 122.1 78 92.3
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 1.9e-26 122.1 78 92.3
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 2.3e-24 115.2 78 91.0
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 1.3e-22 109.4 81 80.2
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 1.3e-22 109.4 81 80.2
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 2.7e-20 101.7 78 78.2
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 4.5e-20 100.9 81 74.1
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 1.1e-18 96.3 81 72.8
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 3.3e-18 94.7 81 71.6
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 5.5e-18 94.0 81 69.1
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 6.1e-17 90.5 81 72.8
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 8.0e-17 90.1 81 70.4
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 8.0e-17 90.1 81 70.4
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 8.0e-17 90.1 81 70.4
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 5.9e-12 73.9 81 61.7
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 6.2e-09 63.9 82 56.1
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 1.4e-08 62.8 79 51.9
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 8.9e-08 60.1 78 46.2
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 55.6
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.6e-07 58.5 78 46.2
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 7.5e-07 57.0 79 48.1
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 9.8e-07 56.6 78 50.0
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.3e-06 56.2 78 48.7
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.3e-06 56.2 78 46.2
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 44.3
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 50.6
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.2e-06 55.5 79 50.6
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.9e-06 55.1 82 46.3
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 2.9e-06 55.1 78 46.2
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 49.4
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 4.9e-06 54.3 78 47.4
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 6.4e-06 53.9 78 44.9
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 45.6
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 8.3e-06 53.5 91 39.6
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 8.3e-06 53.5 78 44.9
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 8.3e-06 53.5 80 52.5
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 8.3e-06 53.5 78 47.4
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 8.3e-06 53.5 78 46.2


User provided reference genes

Program Settings