Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.0e-188 663.3 346 100.0
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.9e-188 661.4 346 99.7
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 8.6e-188 660.2 346 99.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.9e-183 645.2 346 94.5
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.4e-182 642.9 346 95.1
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.0e-172 608.6 345 89.6
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.6e-170 601.7 345 88.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 2.0e-168 595.9 344 88.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.4e-167 590.9 340 88.2
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.4e-166 589.7 341 87.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 4.0e-161 571.6 311 92.9
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 4.0e-145 518.5 341 78.0
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.4e-136 488.8 260 93.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.2e-135 486.1 319 77.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 8.0e-117 424.5 353 61.5
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.3e-116 422.9 368 60.1
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 3.9e-116 422.2 348 62.1
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.0e-115 419.9 344 63.1
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.3e-115 419.1 394 55.6
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 5.7e-115 418.3 369 58.5
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.2e-114 416.4 359 60.7
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.8e-114 416.0 358 60.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.8e-114 416.0 358 60.3
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 3.7e-114 415.6 362 59.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.7e-114 415.6 347 61.1
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 3.7e-114 415.6 349 61.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.1e-113 414.1 339 62.8
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.8e-113 413.3 371 58.0
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.4e-113 412.9 348 60.1
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.1e-113 412.5 353 60.9
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.1e-113 412.1 359 59.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 4.1e-113 412.1 362 60.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.1e-113 412.1 371 58.8
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 5.3e-113 411.8 370 58.4
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.1e-113 411.0 382 56.8
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 9.1e-113 411.0 365 59.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.2e-112 410.6 348 60.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.6e-112 410.2 367 58.0
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.6e-112 409.5 350 60.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 4.5e-112 408.7 344 59.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 5.9e-112 408.3 299 66.9
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.7e-112 407.9 358 60.1
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.0e-111 407.5 368 55.4
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.3e-111 407.1 349 59.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.7e-111 406.8 351 60.7
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.9e-110 403.3 319 63.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 3.2e-110 402.5 281 71.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.1e-109 399.8 363 58.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.1e-109 399.8 355 58.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.1e-109 399.8 325 63.1
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.6e-109 399.1 341 59.2
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.6e-109 399.1 341 60.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 6.7e-108 394.8 362 57.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 6.7e-108 394.8 361 56.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.5e-107 393.7 333 60.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.0e-107 393.3 365 57.0
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 3.3e-107 392.5 361 55.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 8.2e-106 387.9 363 54.8
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.4e-105 387.1 347 59.4
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.8e-105 386.7 360 55.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.8e-105 386.7 349 56.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.4e-105 386.3 363 54.0
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.3e-105 385.2 360 55.0
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.2e-104 384.0 344 59.6
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 3.5e-104 382.5 349 55.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.5e-104 382.5 329 59.9
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 4.5e-104 382.1 344 56.4
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.3e-103 380.6 335 57.6
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.3e-103 380.6 343 57.1
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.3e-103 380.6 333 59.2
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 6.5e-103 378.3 339 57.8
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 6.5e-103 378.3 393 52.4
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.1e-102 377.5 339 57.5
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 4.2e-102 375.6 343 55.7
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 3.6e-101 372.5 414 50.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 4.7e-101 372.1 340 58.5
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 8.0e-101 371.3 351 56.1
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.0e-100 369.4 283 65.0
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.3e-98 364.0 350 56.0
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.7e-98 363.6 342 56.1
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 2.8e-98 362.8 372 53.0
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.1e-97 360.9 329 55.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.8e-97 360.1 329 55.9
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.6e-93 345.9 289 60.9
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.0e-92 344.4 361 52.1
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.8e-91 337.8 270 63.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.3e-90 337.4 245 68.6
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.3e-90 337.4 277 61.4
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.9e-86 323.6 341 52.8
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.2e-85 320.9 338 51.2
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.0e-84 315.8 333 51.1
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 8.9e-84 314.7 218 69.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.2e-83 314.3 386 45.1
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.7e-82 310.5 296 53.0
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 8.3e-82 308.1 232 63.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.0e-80 303.5 357 46.2
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 3.5e-80 302.8 270 56.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.3e-79 300.1 360 46.7
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-78 297.4 240 64.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.9e-78 297.0 308 52.9
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-76 289.7 179 76.0
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 6.8e-76 288.5 327 46.2
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 5.1e-71 272.3 171 75.4
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 4.4e-67 259.2 282 48.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 4.4e-67 259.2 296 51.0
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.9e-62 243.8 330 44.2
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 2.3e-55 220.3 225 52.4
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 7.6e-51 205.3 351 39.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.6e-46 189.1 170 60.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 5.6e-46 189.1 148 60.8
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.2e-43 181.4 300 38.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.4e-36 157.1 140 58.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.4e-34 149.1 185 44.9
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.3e-31 140.6 190 44.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.8e-23 114.4 99 62.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 6.5e-10 69.3 55 60.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.5e-10 68.9 48 66.7
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.5e-09 67.4 104 38.5


User provided reference genes

Program Settings