Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38074 Brassica carinata HOM05D020738 ORTHO05D008451 1.3e-82 309.7 152 100.0
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 8.2e-58 227.3 136 84.6
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 2.4e-25 119.4 90 68.9
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 2.8e-21 105.9 99 57.6
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.4e-20 103.6 99 57.6
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 3.0e-20 102.4 81 67.9
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 8.8e-20 100.9 157 40.8
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 8.8e-20 100.9 116 50.0
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 3.4e-19 99.0 102 52.0
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 7.8e-16 87.8 109 49.5
BcaC04g23032 Brassica carinata HOM05D020738 ORTHO05D031827 2.3e-15 86.3 90 54.4
BcaB08g34581 Brassica carinata HOM05D020738 ORTHO05D008451 5.0e-15 85.1 91 53.8
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 6.6e-15 84.7 109 47.7
BolC9t54178H Brassica oleracea HOM05D020738 ORTHO05D031827 1.1e-14 84.0 90 54.4
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 7.3e-14 81.3 149 39.6
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 8.0e-13 77.8 111 45.0
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 7.5e-11 71.2 42 76.2
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 3.7e-10 68.9 57 61.4
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 7.0e-09 64.7 103 40.8
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 3.9e-07 58.9 90 46.7
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 5.6e-06 55.1 86 38.4


User provided reference genes

Program Settings