Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-282 973.4 499 100.0
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-161 573.2 522 62.5
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-153 547.0 530 60.9
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-148 528.5 545 57.2
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-146 524.2 520 59.6
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-141 507.3 521 58.9
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-140 503.4 532 57.7
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-139 500.7 532 57.7
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-137 492.7 546 55.3
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-121 441.0 527 53.3
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-109 400.6 510 51.0
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-109 400.6 462 56.5
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 8.3e-91 338.6 432 53.7
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-88 328.6 408 51.0
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 6.6e-80 302.4 464 45.0
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-76 291.6 377 51.7
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-49 200.3 446 35.9
BcaC08g45230 Brassica carinata HOM05D006121 ORTHO05D002427 6.0e-49 199.5 289 44.6
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 8.4e-43 179.1 166 63.3
BcaC05g27828 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-42 176.0 160 63.8
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-40 171.0 213 41.8
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-36 158.7 230 39.1
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 2.0e-36 157.9 130 63.1
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 6.4e-35 152.9 548 28.1
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-34 151.8 319 33.5
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-34 151.8 178 52.8
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-34 150.2 545 29.7
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-33 148.7 212 39.2
BcaC06g35787 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-33 148.3 128 66.4
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 6.0e-33 146.4 227 37.4
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-32 144.8 524 28.2
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-31 142.1 119 68.1
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-30 138.3 202 42.1
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 8.1e-30 136.0 200 40.5
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 8.1e-30 136.0 505 27.5
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 8.1e-30 136.0 201 38.8
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 2.0e-28 131.3 146 56.8
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 7.6e-28 129.4 625 26.1
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 6.5e-27 126.3 72 81.9
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 1.4e-26 125.2 307 31.6
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-26 124.4 200 39.5
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-26 123.6 163 53.4
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-23 113.6 120 55.8
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-22 110.5 437 28.8
BcaC06g33796 Brassica carinata HOM05D000529 ORTHO05D014935 4.5e-20 103.6 68 83.8
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-19 102.1 451 27.5
BcaB05g23675 Brassica carinata HOM05D006121 ORTHO05D016754 3.8e-19 100.5 119 51.3
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-18 98.2 93 49.5
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-18 97.1 157 37.6
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 9.3e-18 95.9 210 30.5
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-16 92.4 129 38.0
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-16 90.5 93 45.2
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 5.1e-16 90.1 125 37.6
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-16 89.7 125 38.4
BcaC03g16573 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-15 87.0 174 39.1
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-15 87.0 90 46.7
BcaC06g33795 Brassica carinata HOM05D003421 ORTHO05D003268 9.7e-15 85.9 241 34.9
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-14 85.5 125 35.2
BolC5t32557H Brassica oleracea HOM05D006121 ORTHO05D009559 4.8e-14 83.6 97 46.4
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 4.8e-14 83.6 92 50.0
BcaC08g44150 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-13 81.3 85 57.6
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-12 77.0 214 28.0
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 5.9e-12 76.6 63 58.7
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 5.9e-12 76.6 141 32.6
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 7.7e-12 76.3 141 32.6
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-11 75.1 138 33.3
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-11 75.1 214 28.5
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-11 74.7 138 33.3
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-11 74.7 170 31.2
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.9e-11 74.3 138 33.3
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-11 73.9 216 28.7
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-11 73.9 138 32.6
BcaC09g49805 Brassica carinata HOM05D006121 ORTHO05D023846 3.8e-11 73.9 45 73.3
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.0e-11 73.6 214 28.5
BcaC02g10790 Brassica carinata HOM05D006121 ORTHO05D023846 5.0e-11 73.6 49 69.4
BcaC05g27709 Brassica carinata HOM05D006121 ORTHO05D093169 5.0e-11 73.6 252 31.3
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 6.5e-11 73.2 95 37.9
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.5e-11 72.8 138 32.6
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-10 72.4 138 32.6
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-10 72.0 138 32.6
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-10 72.0 138 31.9
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-10 72.0 138 32.6
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.9e-10 71.6 138 32.6
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-10 71.2 138 31.9
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.2e-10 70.9 138 32.6
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.2e-10 70.9 210 29.0
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.2e-10 70.5 261 27.2
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 4.2e-10 70.5 241 27.4
BcaC04g19800 Brassica carinata HOM05D006121 ORTHO05D023846 4.2e-10 70.5 45 68.9
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.2e-10 69.7 138 31.9
BcaB02g06461 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-09 68.9 206 31.1
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-09 68.6 119 33.6
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 2.1e-09 68.2 141 30.5
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.6e-09 67.4 249 25.3
BraA05t20949Z Brassica rapa HOM05D006121 ORTHO05D009559 4.6e-09 67.0 62 51.6
BcaNung03347 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-09 66.6 58 63.8
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-08 65.9 80 41.2
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-08 65.5 55 49.1
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-08 64.7 76 42.1
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.0e-08 64.3 152 25.0
BraA06t25080Z Brassica rapa HOM05D006121 ORTHO05D023846 6.7e-08 63.2 33 81.8
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.1e-07 62.4 368 23.9
BcaC08g44795 Brassica carinata HOM05D006121 ORTHO05D027423 1.1e-07 62.4 98 40.8
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 7.4e-07 59.7 223 23.8
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 7.4e-07 59.7 299 26.1
CARHR119450 Cardamine hirsuta HOM05D006121 ORTHO05D043487 7.4e-07 59.7 80 37.5
BcaC06g34988 Brassica carinata HOM05D006121 ORTHO05D009559 9.7e-07 59.3 38 76.3
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-06 58.9 79 40.5
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-06 58.5 86 39.5
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 2.8e-06 57.8 102 33.3
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 3.7e-06 57.4 152 28.3
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 4.8e-06 57.0 196 29.6
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-06 57.0 75 37.3
BcaC08g44151 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-06 56.6 78 46.2
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 8.2e-06 56.2 152 28.3


User provided reference genes

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