Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 2.1e-39 165.2 82 100.0
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 2.1e-39 165.2 82 100.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 6.0e-39 163.7 82 98.8
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 6.0e-39 163.7 82 98.8
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 5.6e-37 157.1 82 93.9
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.0e-34 148.7 75 97.3
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 2.0e-34 148.7 75 97.3
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.4e-32 142.5 75 93.3
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.9e-32 142.1 75 93.3
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 4.2e-32 141.0 75 92.0
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 9.3e-32 139.8 75 92.0
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 2.1e-31 138.7 75 88.0
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 7.8e-31 136.7 75 89.3
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.7e-30 135.6 75 89.3
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 2.3e-30 135.2 75 88.0
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 3.3e-29 131.3 74 85.1
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 3.3e-29 131.3 74 85.1
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 7.3e-29 130.2 76 80.3
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 7.3e-29 130.2 76 80.3
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 7.3e-29 130.2 76 80.3
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 1.3e-28 129.4 75 85.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.6e-28 129.0 76 80.3
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.6e-28 129.0 75 82.7
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.6e-28 129.0 75 82.7
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 2.1e-28 128.6 75 84.0
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 2.1e-28 128.6 75 81.3
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.1e-28 128.6 76 77.6
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 2.1e-28 128.6 76 77.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 3.6e-28 127.9 73 86.3
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 3.6e-28 127.9 75 82.7
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 3.6e-28 127.9 76 78.9
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 4.8e-28 127.5 74 81.1
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 4.8e-28 127.5 75 81.3
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 6.2e-28 127.1 74 81.1
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 1.1e-27 126.3 75 81.3
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.4e-27 125.9 74 79.7
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.4e-27 125.9 74 81.1
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 1.8e-27 125.6 75 80.0
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.4e-27 125.2 76 78.9
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 5.3e-27 124.0 74 79.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 6.9e-27 123.6 74 79.7
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 6.9e-27 123.6 73 82.2
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.2e-26 122.9 74 78.4
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.2e-26 122.9 75 76.0
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.5e-26 122.5 74 78.4
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.5e-26 122.5 75 76.0
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.5e-26 122.5 72 80.6
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-26 122.5 76 73.7
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 2.0e-26 122.1 74 77.0
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 7.6e-26 120.2 80 70.0
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 7.6e-26 120.2 75 74.7
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 9.9e-26 119.8 80 70.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 9.9e-26 119.8 75 77.3
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 1.3e-25 119.4 73 78.1
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.3e-25 119.4 74 74.3
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.7e-25 119.0 74 77.0
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.7e-25 119.0 74 75.7
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.7e-25 119.0 74 75.7
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 2.9e-25 118.2 75 76.0
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.9e-25 118.2 76 75.0
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.9e-25 118.2 76 75.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 3.8e-25 117.9 74 75.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 4.9e-25 117.5 76 73.7
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 6.4e-25 117.1 74 71.6
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 8.4e-25 116.7 74 74.3
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 8.4e-25 116.7 75 69.3
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.1e-24 116.3 67 85.1
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 1.4e-24 115.9 80 67.5
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 71.6
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 73.0
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 1.9e-24 115.5 71 74.6
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 1.9e-24 115.5 74 71.6
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 2.4e-24 115.2 76 69.7
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.4e-24 115.2 80 66.2
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 3.2e-24 114.8 75 70.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 3.2e-24 114.8 74 74.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 7.1e-24 113.6 74 71.6
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 7.1e-24 113.6 74 71.6
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 7.1e-24 113.6 76 72.4
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.1e-24 113.6 74 74.3
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 1.2e-23 112.8 74 71.6
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 1.2e-23 112.8 74 71.6
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.6e-23 112.5 76 67.1
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 3.5e-23 111.3 73 72.6
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 7.9e-23 110.2 73 71.2
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.3e-22 109.4 73 68.5
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 1.3e-22 109.4 73 69.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.8e-22 109.0 73 68.5
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 2.3e-22 108.6 75 66.7
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 3.0e-22 108.2 66 77.3
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 3.9e-22 107.8 73 68.5
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 3.9e-22 107.8 73 68.5
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 1.1e-21 106.3 75 70.7
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 4.3e-21 104.4 104 54.8
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 9.6e-21 103.2 77 64.9
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 1.6e-20 102.4 75 65.3
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 1.6e-20 102.4 75 65.3
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 2.1e-20 102.1 75 65.3
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 2.1e-20 102.1 75 65.3
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 2.8e-20 101.7 73 67.1
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 4.8e-20 100.9 67 67.2
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 4.8e-20 100.9 73 64.4
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 9.0e-19 96.7 75 62.7
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 1.5e-18 95.9 77 57.1
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 2.0e-18 95.5 72 63.9
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 7.6e-18 93.6 68 60.3
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 4.9e-17 90.9 118 43.2
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.2e-15 86.3 66 63.6
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 7.9e-15 83.6 68 54.4
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.6e-12 75.9 47 74.5
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 1.8e-11 72.4 62 53.2
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 2.6e-10 68.6 46 65.2
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 7.6e-10 67.0 43 69.8
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 1.0e-09 66.6 57 56.1
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 6.5e-09 63.9 67 47.8
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.1e-08 63.2 43 62.8
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 5.5e-08 60.8 63 44.4
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.1e-08 60.5 41 68.3
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 3.5e-07 58.2 34 79.4
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 4.6e-07 57.8 43 62.8
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 7.9e-07 57.0 33 75.8
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 3.0e-06 55.1 35 68.6


User provided reference genes

Program Settings