Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.9e-30 135.2 70 100.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.9e-30 135.2 70 100.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 9.1e-28 126.3 68 95.6
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 9.1e-28 126.3 68 95.6
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 5.9e-27 123.6 64 100.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.1e-25 119.4 68 89.7
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 1.1e-25 119.4 68 89.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.1e-25 119.4 68 89.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.9e-25 118.6 68 89.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.5e-25 118.2 65 90.8
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 9.4e-25 116.3 68 88.2
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 4.7e-24 114.0 66 86.4
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.0e-23 112.8 68 82.4
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.0e-23 112.8 68 82.4
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.8e-23 112.1 68 80.9
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.3e-23 111.7 70 77.1
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 3.9e-23 110.9 68 80.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.9e-23 110.9 68 80.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.9e-23 110.9 68 79.4
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.9e-23 110.9 68 80.9
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 5.1e-23 110.5 68 79.4
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 5.1e-23 110.5 68 79.4
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.1e-23 110.5 68 77.9
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 6.7e-23 110.2 67 79.1
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 8.8e-23 109.8 68 77.9
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 8.8e-23 109.8 68 77.9
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 8.8e-23 109.8 68 77.9
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.1e-22 109.4 68 79.4
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.1e-22 109.4 68 79.4
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.1e-22 109.4 68 79.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 80.9
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 80.9
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 77.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 77.9
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.5e-22 109.0 65 83.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 79.4
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.5e-22 109.0 68 79.4
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 76.5
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 76.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 75.0
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 75.0
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 76.5
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.0e-22 108.6 68 77.9
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 2.6e-22 108.2 68 73.5
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.6e-22 108.2 68 79.4
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.6e-22 108.2 68 79.4
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.6e-22 108.2 68 75.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.6e-22 108.2 68 75.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 75.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 77.9
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 76.5
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 75.0
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 75.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 3.3e-22 107.8 68 75.0
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 4.4e-22 107.5 68 76.5
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.4e-22 107.5 68 76.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 4.4e-22 107.5 66 77.3
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 76.5
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 76.5
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.7e-22 107.1 66 77.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 76.5
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 77.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 76.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 5.7e-22 107.1 68 76.5
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 7.4e-22 106.7 68 75.0
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 9.7e-22 106.3 68 73.5
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 9.7e-22 106.3 68 73.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 9.7e-22 106.3 68 75.0
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.3e-21 105.9 68 75.0
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.3e-21 105.9 68 77.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.2e-21 105.1 68 73.5
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.8e-21 104.8 68 76.5
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.8e-21 104.8 69 76.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 4.8e-21 104.0 68 73.5
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.8e-21 104.0 68 76.5
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 4.8e-21 104.0 68 73.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 4.8e-21 104.0 69 76.8
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.3e-21 103.6 68 72.1
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 8.2e-21 103.2 69 75.4
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 8.2e-21 103.2 68 73.5
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.1e-20 102.8 68 72.1
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-20 102.8 69 75.4
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.1e-20 102.8 69 75.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-20 102.4 66 78.8
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.4e-20 102.4 68 72.1
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.4e-20 101.7 69 73.9
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.4e-20 101.7 68 72.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.4e-20 101.7 68 70.6
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.1e-20 101.3 68 73.5
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 5.3e-20 100.5 68 73.5
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 6.9e-20 100.1 68 67.6
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 9.1e-20 99.8 68 70.6
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.2e-19 99.4 68 70.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.5e-19 99.0 69 71.0
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.0e-19 98.6 68 69.1
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.0e-19 98.6 65 70.8
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.6e-19 98.2 68 75.0
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.9e-17 92.0 59 79.7
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.5e-17 91.7 62 75.8
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.3e-13 79.3 58 62.1
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.1e-12 74.3 49 67.3
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 8.5e-10 66.6 62 48.4
BcaB05g21912 Brassica carinata HOM05D006610 ORTHO05D008447 9.4e-09 63.2 64 57.8


User provided reference genes

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