Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37701 Brassica carinata HOM05D008704 ORTHO05D012979 7.3e-36 153.3 74 100.0
BolC8t48083H Brassica oleracea HOM05D008704 ORTHO05D012979 7.3e-36 153.3 74 100.0
A08p10210 Brassica napus HOM05D008704 ORTHO05D012979 3.8e-32 141.0 74 91.9
A08p10220 Brassica napus HOM05D008704 ORTHO05D012979 3.8e-32 141.0 74 91.9
BraA08t33019Z Brassica rapa HOM05D008704 ORTHO05D012979 3.8e-32 141.0 74 91.9
C09p07750 Brassica napus HOM05D008704 ORTHO05D012979 4.6e-22 107.5 68 75.0
C09p07760 Brassica napus HOM05D008704 ORTHO05D012979 4.6e-22 107.5 68 75.0
C09p07770 Brassica napus HOM05D008704 ORTHO05D012979 4.6e-22 107.5 68 75.0
BolC9t53692H Brassica oleracea HOM05D008704 ORTHO05D012979 4.6e-22 107.5 68 75.0
BolC9t53691H Brassica oleracea HOM05D008704 ORTHO05D012979 6.0e-22 107.1 68 75.0
BolC9t53693H Brassica oleracea HOM05D008704 ORTHO05D012979 1.3e-21 105.9 68 73.5
AL4G32942 Arabidopsis lyrata HOM05D008704 ORTHO05D012979 1.3e-19 99.4 67 67.2
AT2G36724 Arabidopsis thaliana HOM05D008704 ORTHO05D012979 1.4e-18 95.9 72 58.3
BcaB04g19872 Brassica carinata HOM05D008704 ORTHO05D012979 4.0e-18 94.4 68 64.7
Thhalv10028125m.g Eutrema salsugineum HOM05D008704 ORTHO05D012979 3.8e-16 87.8 53 71.7
Carub.0004s1857 Capsella rubella HOM05D008704 ORTHO05D012979 1.1e-15 86.3 68 55.9
CARHR131070 Cardamine hirsuta HOM05D008704 ORTHO05D012979 2.7e-14 81.6 68 57.4
A02p18270 Brassica napus HOM05D008704 ORTHO05D012580 8.1e-11 70.1 56 57.1
AL4G20080 Arabidopsis lyrata HOM05D008704 ORTHO05D012580 1.4e-10 69.3 53 60.4
BcaB05g25267 Brassica carinata HOM05D008704 ORTHO05D012580 1.8e-10 68.9 56 60.7
A02p18260 Brassica napus HOM05D008704 ORTHO05D012580 2.4e-10 68.6 56 60.7
BcaC03g15418 Brassica carinata HOM05D008704 ORTHO05D012580 3.1e-10 68.2 56 58.9
C02p30300 Brassica napus HOM05D008704 ORTHO05D012580 3.1e-10 68.2 56 58.9
BolC2t09080H Brassica oleracea HOM05D008704 ORTHO05D012580 4.0e-10 67.8 56 60.7
BcaC03g15416 Brassica carinata HOM05D008704 ORTHO05D012580 6.9e-10 67.0 58 58.6
C02p30290 Brassica napus HOM05D008704 ORTHO05D012580 6.9e-10 67.0 58 58.6
Thhalv10028013m.g Eutrema salsugineum HOM05D008704 ORTHO05D012979 6.9e-10 67.0 37 75.7
Sp5g35340 Schrenkiella parvula HOM05D008704 ORTHO05D012580 6.9e-10 67.0 56 57.1
AT2G26865 Arabidopsis thaliana HOM05D008704 ORTHO05D012580 1.2e-09 66.2 49 61.2
BcaC03g15964 Brassica carinata HOM05D008704 ORTHO05D012580 4.5e-09 64.3 53 58.5
C02p37300 Brassica napus HOM05D008704 ORTHO05D012580 4.5e-09 64.3 53 58.5
BolC2t09740H Brassica oleracea HOM05D008704 ORTHO05D012580 4.5e-09 64.3 53 58.5
Thhalv10019401m.g Eutrema salsugineum HOM05D008704 ORTHO05D012580 7.6e-09 63.5 56 57.1
A07p45200 Brassica napus HOM05D008704 ORTHO05D012580 1.3e-08 62.8 56 53.6
A06p20070 Brassica napus HOM05D008704 ORTHO05D012580 2.2e-08 62.0 68 47.1
BraA06t25093Z Brassica rapa HOM05D008704 ORTHO05D012580 2.2e-08 62.0 68 47.1
Carub.0004s0737 Capsella rubella HOM05D008704 ORTHO05D012580 2.2e-08 62.0 52 53.8
CARHR131080 Cardamine hirsuta HOM05D008704 ORTHO05D012979 4.6e-06 54.3 76 39.5
BraA07t32023Z Brassica rapa HOM05D008704 ORTHO05D012580 7.9e-06 53.5 42 61.9


User provided reference genes

Program Settings