Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37591 Brassica carinata HOM05D013487 ORTHO05D015348 4.8e-107 391.3 224 100.0
BolC8t47942H Brassica oleracea HOM05D013487 ORTHO05D015348 3.5e-105 385.2 224 98.7
BraA08t32908Z Brassica rapa HOM05D013487 ORTHO05D015348 1.3e-99 366.7 224 95.5
A08p09060 Brassica napus HOM05D013487 ORTHO05D015348 6.3e-99 364.4 224 95.1
BcaB04g17956 Brassica carinata HOM05D013487 ORTHO05D015348 7.0e-82 307.8 224 73.7
Sp1g28320 Schrenkiella parvula HOM05D013487 ORTHO05D015348 7.3e-63 244.6 231 61.5
Thhalv10009422m.g Eutrema salsugineum HOM05D013487 ORTHO05D015348 1.3e-59 233.8 231 58.9
AL1G46850 Arabidopsis lyrata HOM05D013487 ORTHO05D015348 1.4e-45 187.2 233 50.2
AT1G32585 Arabidopsis thaliana HOM05D013487 ORTHO05D015348 9.6e-39 164.5 229 46.3
CARHR032050 Cardamine hirsuta HOM05D013487 ORTHO05D015348 4.6e-25 119.0 194 42.8
Carub.0001s3099 Capsella rubella HOM05D013487 ORTHO05D015348 4.6e-17 92.4 201 40.8
CARHR032040 Cardamine hirsuta HOM05D013487 ORTHO05D015348 8.7e-16 88.2 110 50.0
BcaC02g07727 Brassica carinata HOM05D002068 ORTHO05D002029 2.2e-06 57.0 99 42.4
Carub.0004s1693 Capsella rubella HOM05D002068 ORTHO05D002029 3.7e-06 56.2 95 43.2
BcaB06g28833 Brassica carinata HOM05D002068 ORTHO05D002029 6.3e-06 55.5 97 41.2
Thhalv10016759m.g Eutrema salsugineum HOM05D002068 ORTHO05D002029 8.2e-06 55.1 96 42.7


User provided reference genes

Program Settings