Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 8.0e-208 726.9 371 100.0
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 9.2e-204 713.4 371 97.3
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 2.7e-203 711.8 370 97.0
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 6.6e-194 680.6 372 92.7
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 3.0e-186 655.2 417 83.7
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 7.3e-185 650.6 371 88.4
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 9.3e-172 607.1 373 84.2
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 2.7e-171 605.5 373 83.9
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 6.0e-171 604.4 372 82.3
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.3e-170 602.4 373 83.6
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.3e-170 602.4 373 83.6
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 8.7e-170 600.5 373 82.6
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.5e-169 599.7 368 81.2
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.9e-169 599.4 373 81.5
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.2e-165 585.9 375 80.3
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 3.8e-165 585.1 373 81.5
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 4.3e-153 545.0 322 86.6
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 4.8e-152 541.6 374 71.9
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 7.4e-145 517.7 376 66.8
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 8.8e-138 494.2 340 71.5
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.4e-137 491.1 363 67.8
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.3e-136 490.3 341 70.4
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.8e-136 489.2 341 70.4
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 6.3e-136 488.0 337 70.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 2.6e-134 482.6 344 69.2
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 1.7e-133 479.9 335 69.6
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.2e-133 479.6 335 69.9
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 2.2e-133 479.6 358 66.5
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.9e-133 479.2 365 66.3
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 3.8e-133 478.8 384 62.2
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 6.5e-133 478.0 378 63.5
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 1.1e-132 477.2 325 71.7
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 3.2e-132 475.7 343 68.2
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 4.2e-132 475.3 376 62.5
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 4.2e-132 475.3 362 66.3
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 4.2e-132 475.3 364 65.7
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.5e-132 474.9 379 64.6
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 9.4e-132 474.2 340 68.8
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.6e-131 473.4 331 68.9
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 2.1e-131 473.0 322 70.5
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 3.6e-131 472.2 345 66.7
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.7e-131 471.9 365 65.5
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 6.1e-131 471.5 321 70.4
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 6.1e-131 471.5 332 69.6
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 7.9e-131 471.1 329 69.3
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.0e-130 470.7 354 66.7
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 1.4e-130 470.3 325 69.5
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.8e-130 469.9 336 68.8
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 1.8e-130 469.9 331 68.9
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 2.3e-130 469.5 379 63.1
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 3.0e-130 469.2 353 66.3
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 5.1e-130 468.4 337 68.2
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 5.1e-130 468.4 332 68.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 8.8e-130 467.6 392 62.8
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.1e-129 467.2 333 67.6
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 1.1e-129 467.2 333 69.1
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 1.5e-129 466.8 326 68.7
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 3.3e-129 465.7 345 66.4
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 1.3e-128 463.8 367 65.1
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 1.7e-128 463.4 325 68.3
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 1.7e-128 463.4 396 61.4
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 2.8e-128 462.6 323 69.0
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.7e-128 462.2 334 66.8
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 3.7e-128 462.2 343 67.6
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-128 461.1 337 67.4
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-128 461.1 337 67.4
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 1.1e-127 460.7 399 60.7
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.8e-127 459.9 334 66.2
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 4.1e-127 458.8 359 64.3
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 5.3e-127 458.4 399 59.9
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 3.5e-126 455.7 339 64.9
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 5.9e-126 454.9 348 66.1
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 1.5e-124 450.3 347 64.3
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 4.7e-123 445.3 355 63.1
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 4.7e-123 445.3 323 65.9
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 2.3e-122 443.0 276 75.7
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 8.8e-122 441.0 342 63.7
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 2.0e-121 439.9 361 61.2
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 3.3e-121 439.1 381 59.6
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.4e-121 438.7 367 59.4
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 4.4e-121 438.7 367 59.4
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 2.2e-120 436.4 278 73.4
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 6.3e-120 434.9 373 60.1
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.4e-119 433.7 345 60.9
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 1.8e-119 433.3 333 64.3
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 2.0e-118 429.9 394 58.9
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 3.5e-118 429.1 359 61.0
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 4.5e-118 428.7 353 62.0
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 5.5e-116 421.8 519 47.8
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 4.7e-115 418.7 451 50.1
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 6.1e-115 418.3 344 61.6
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 1.5e-113 413.7 418 55.5
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.5e-113 413.7 327 62.7
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 3.4e-113 412.5 341 58.9
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 4.4e-113 412.1 354 59.6
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.8e-111 406.8 324 63.6
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 7.0e-111 404.8 325 62.2
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 1.2e-110 404.1 370 56.8
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 4.5e-110 402.1 329 60.2
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 1.9e-108 396.7 346 56.6
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 6.1e-107 391.7 328 60.7
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.2e-104 383.3 271 68.3
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 8.3e-104 381.3 379 54.1
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.1e-103 380.9 299 63.2
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 6.6e-101 371.7 263 69.6
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 4.7e-99 365.5 307 61.6
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 1.0e-98 364.4 258 67.8
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 9.2e-95 351.3 274 64.6
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 7.8e-94 348.2 219 74.4
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 6.6e-93 345.1 216 75.0
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.8e-91 339.7 216 72.2
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 5.8e-89 332.0 306 58.2
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 3.5e-86 322.8 262 64.9
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 2.8e-83 313.2 218 71.1
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 5.2e-82 308.9 219 68.9
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 2.9e-80 303.1 546 36.6
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 2.1e-78 297.0 202 68.3
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.7e-77 293.9 216 65.3
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-77 292.7 268 54.5
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.5e-76 290.0 215 66.0
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 7.6e-73 278.5 242 58.7
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.9e-68 263.8 328 47.6
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 3.8e-64 249.6 186 65.6
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.0e-42 176.4 254 39.8
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.5e-38 163.3 262 36.3
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 3.0e-29 133.7 286 35.3
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.2e-27 127.5 123 54.5
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 6.9e-26 122.5 88 73.9
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 5.9e-25 119.4 130 47.7
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 1.7e-24 117.9 252 32.5
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.8e-24 116.7 100 64.0
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.1e-23 115.2 97 61.9
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.6e-22 109.8 64 79.7
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 2.3e-21 107.5 102 52.9
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-21 107.5 64 79.7
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-21 107.5 64 79.7
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.0e-21 107.1 102 54.9
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-20 104.8 64 75.0
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-20 104.8 64 75.0
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-20 104.8 64 75.0
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.8e-19 100.5 64 71.9
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.6e-14 84.7 54 75.9
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 3.0e-13 80.5 170 35.9
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 1.1e-12 78.6 73 54.8
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 2.0e-12 77.8 236 28.4
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 2.6e-12 77.4 166 30.7
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 7.7e-09 65.9 170 30.6
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 3.2e-07 60.5 195 28.7


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