Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37552 Brassica carinata HOM05D010997 ORTHO05D014498 2.8e-60 235.0 108 100.0
BcaC03g14877 Brassica carinata HOM05D010997 ORTHO05D014498 7.4e-53 210.3 103 92.2
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 9.6e-53 209.9 103 93.2
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 9.6e-53 209.9 103 93.2
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 2.1e-52 208.8 103 91.3
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 1.8e-51 205.7 114 85.1
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 2.0e-50 202.2 103 89.3
A06p08980 Brassica napus HOM05D010997 ORTHO05D014498 9.6e-45 183.3 87 96.6
C06p30270 Brassica napus HOM05D010997 ORTHO05D014498 7.4e-37 157.1 79 92.4
BcaC08g45395 Brassica carinata HOM05D010997 ORTHO05D014498 7.2e-32 140.6 103 68.9
C06p24900 Brassica napus HOM05D010997 ORTHO05D003352 3.9e-22 108.2 92 57.6
BolC2t07709H Brassica oleracea HOM05D010997 ORTHO05D014498 6.3e-20 100.9 45 100.0
BolC4t26614H Brassica oleracea HOM05D010997 ORTHO05D014498 6.3e-20 100.9 45 100.0
BcaC06g34649 Brassica carinata HOM05D010997 ORTHO05D032638 4.1e-19 98.2 58 81.0
C07p26140 Brassica napus HOM05D010997 ORTHO05D032638 4.1e-19 98.2 58 81.0
BolC7t43140H Brassica oleracea HOM05D010997 ORTHO05D032638 4.1e-19 98.2 58 81.0
BolC8t48766H Brassica oleracea HOM05D010997 ORTHO05D014498 4.1e-19 98.2 45 97.8
BolC6t38190H Brassica oleracea HOM05D010997 ORTHO05D014498 1.5e-18 96.3 45 97.8
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 3.2e-16 88.6 109 41.3
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-15 86.3 109 40.4
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.6e-15 86.3 101 42.6
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-15 85.9 98 41.8
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-15 85.1 98 41.8
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.1e-15 84.3 102 38.2
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 8.0e-15 84.0 98 40.8
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-15 84.0 98 40.8
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-14 83.6 98 41.8
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-14 83.2 98 46.9
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-14 82.8 98 39.8
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-13 78.2 73 47.9
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-13 77.8 102 36.3
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 9.7e-13 77.0 105 37.1
A06p31430 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-12 76.6 92 39.1
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-12 76.6 101 35.6
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-12 75.1 92 39.1
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-11 72.4 109 35.8
C08p23400 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-11 71.6 89 38.2
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.6e-10 68.9 98 35.7
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.0e-09 67.0 98 34.7
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.0e-09 67.0 88 36.4
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-09 67.0 101 32.7
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-09 67.0 77 42.9
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.0e-09 67.0 75 42.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-09 63.9 77 41.6
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 5.5e-08 61.2 101 28.7
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 7.2e-08 60.8 61 44.3
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-07 60.1 101 29.7
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 58.9 95 33.7
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-07 57.8 104 29.8
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-07 57.8 101 28.7
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-07 57.8 101 28.7
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 8.0e-07 57.4 104 29.8
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 56.2 104 28.8


User provided reference genes

Program Settings