Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 2.7e-120 435.3 208 100.0
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 6.5e-74 281.2 176 77.8
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 3.4e-70 268.9 152 84.2
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 1.1e-68 263.8 164 79.3
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 5.9e-67 258.1 164 77.4
BcaC03g16524 Brassica carinata HOM05D007986 ORTHO05D003268 2.9e-58 229.2 129 83.7
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 3.0e-42 176.0 190 51.6
BraA05t21054Z Brassica rapa HOM05D007986 ORTHO05D003268 8.6e-42 174.5 120 72.5
BcaC03g16495 Brassica carinata HOM05D007986 ORTHO05D003268 1.5e-41 173.7 120 74.2
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 6.8e-39 164.9 190 51.6
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 8.3e-37 157.9 182 45.1
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 1.4e-36 157.1 173 45.7
BcaB06g27774 Brassica carinata HOM05D007986 ORTHO05D003268 1.9e-36 156.8 104 72.1
BolC4t24051H Brassica oleracea HOM05D007986 ORTHO05D003268 7.1e-36 154.8 131 57.3
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 9.2e-36 154.5 176 46.6
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-35 153.3 184 46.7
BcaB08g34673 Brassica carinata HOM05D007986 ORTHO05D003268 2.7e-35 152.9 118 64.4
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-35 152.1 149 48.3
BcaC01g02179 Brassica carinata HOM05D007986 ORTHO05D003268 7.8e-35 151.4 87 82.8
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-33 147.5 199 43.7
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 1.6e-32 143.7 160 46.9
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 3.6e-32 142.5 164 44.5
BcaC04g20599 Brassica carinata HOM05D000589 ORTHO05D003268 6.2e-32 141.7 88 83.0
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 6.2e-32 141.7 180 45.0
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 1.8e-31 140.2 129 53.5
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 4.0e-31 139.0 129 51.9
BolC3t19165H Brassica oleracea HOM05D003421 ORTHO05D003268 5.2e-31 138.7 150 48.0
BcaC03g16132 Brassica carinata HOM05D007986 ORTHO05D003268 8.9e-31 137.9 90 73.3
BraA09t38727Z Brassica rapa HOM05D007986 ORTHO05D003268 5.8e-30 135.2 190 42.6
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 2.9e-29 132.9 128 49.2
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 1.9e-28 130.2 164 42.7
BolC9t55761H Brassica oleracea HOM05D007986 ORTHO05D003268 1.9e-28 130.2 96 64.6
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 1.9e-28 130.2 183 40.4
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 3.2e-28 129.4 188 39.4
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 7.1e-28 128.3 110 51.8
BcaC03g16496 Brassica carinata HOM05D007986 ORTHO05D003268 1.0e-26 124.4 97 63.9
BcaC06g35914 Brassica carinata HOM05D007986 ORTHO05D003268 1.0e-26 124.4 93 67.7
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 1.7e-26 123.6 89 64.0
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 2.3e-26 123.2 180 41.7
BolC3t19084H Brassica oleracea HOM05D003421 ORTHO05D003268 3.9e-26 122.5 67 85.1
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 1.1e-25 120.9 168 38.1
BcaC05g27582 Brassica carinata HOM05D007986 ORTHO05D003268 7.3e-25 118.2 98 60.2
BcaC01g02170 Brassica carinata HOM05D007986 ORTHO05D003268 9.6e-25 117.9 87 70.1
BcaC01g02127 Brassica carinata HOM05D007986 ORTHO05D003268 3.6e-24 115.9 97 61.9
BolC2t10395H Brassica oleracea HOM05D007986 ORTHO05D003268 3.6e-24 115.9 65 83.1
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 3.6e-24 115.9 181 37.6
BolC4t24296H Brassica oleracea HOM05D003421 ORTHO05D003268 6.2e-24 115.2 109 44.0
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-23 114.4 178 38.8
BcaC08g46111 Brassica carinata HOM05D007986 ORTHO05D003268 4.0e-23 112.5 90 61.1
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 1.3e-21 107.5 139 48.9
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 3.8e-21 105.9 86 54.7
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 3.8e-21 105.9 86 54.7
BcaB02g11464 Brassica carinata HOM05D007986 ORTHO05D003268 1.9e-20 103.6 88 61.4
BcaB07g33928 Brassica carinata HOM05D007986 ORTHO05D003268 3.2e-20 102.8 74 70.3
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 3.2e-20 102.8 74 55.4
A01p26540 Brassica napus HOM05D003421 ORTHO05D003268 5.4e-20 102.1 84 54.8
BcaC08g43724 Brassica carinata HOM05D007986 ORTHO05D003268 7.1e-20 101.7 72 72.2
BolC4t23987H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-19 100.1 148 37.8
BcaB03g16313 Brassica carinata HOM05D008969 ORTHO05D003268 4.6e-19 99.0 180 37.2
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 2.3e-18 96.7 173 32.9
BcaC06g35968 Brassica carinata HOM05D003421 ORTHO05D003268 1.9e-17 93.6 153 36.6
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 5.6e-17 92.0 95 48.4
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 9.6e-17 91.3 79 51.9
BcaC03g16497 Brassica carinata HOM05D007986 ORTHO05D003268 6.2e-16 88.6 70 61.4
BcaC02g10758 Brassica carinata HOM05D003421 ORTHO05D003268 2.4e-15 86.7 131 40.5
BcaC02g10537 Brassica carinata HOM05D007986 ORTHO05D003268 4.0e-15 85.9 51 88.2
BcaB04g17960 Brassica carinata HOM05D007986 ORTHO05D003268 6.9e-15 85.1 77 57.1
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 1.2e-14 84.3 87 47.1
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 1.2e-14 84.3 76 50.0
BraA09t38671Z Brassica rapa HOM05D003421 ORTHO05D043141 2.0e-14 83.6 90 43.3
BcaB01g01106 Brassica carinata HOM05D003421 ORTHO05D003268 2.6e-14 83.2 82 53.7
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 3.4e-14 82.8 103 35.0
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 5.8e-14 82.0 116 38.8
BolC2t10278H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-13 80.9 64 60.9
BcaB03g16541 Brassica carinata HOM05D007986 ORTHO05D003268 2.9e-13 79.7 76 50.0
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 2.9e-13 79.7 76 47.4
C05p36560 Brassica napus HOM05D003421 ORTHO05D003268 3.8e-13 79.3 74 51.4
BcaC03g16520 Brassica carinata HOM05D007986 ORTHO05D003268 4.9e-13 79.0 59 66.1
BcaC02g10561 Brassica carinata HOM05D003421 ORTHO05D003268 6.4e-13 78.6 73 57.5
BcaC05g28051 Brassica carinata HOM05D007986 ORTHO05D003268 6.4e-13 78.6 56 67.9
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-12 77.4 127 32.3
BraA05t18958Z Brassica rapa HOM05D008596 ORTHO05D003268 1.4e-12 77.4 76 47.4
SpUn0003_0260 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.4e-12 77.4 105 34.3
BcaB08g35568 Brassica carinata HOM05D002377 ORTHO05D002656 2.4e-12 76.6 45 73.3
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 3.2e-12 76.3 120 29.2
BcaB01g01343 Brassica carinata HOM05D003421 ORTHO05D032085 5.4e-12 75.5 178 32.0
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 5.4e-12 75.5 102 33.3
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 1.2e-11 74.3 97 32.0
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 1.2e-11 74.3 112 32.1
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 1.6e-11 73.9 116 28.4
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 1.6e-11 73.9 116 28.4
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 2.1e-11 73.6 73 45.2
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 2.1e-11 73.6 123 31.7
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 2.7e-11 73.2 125 31.2
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 3.5e-11 72.8 183 29.5
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 3.5e-11 72.8 125 31.2
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-11 72.4 52 55.8
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 7.9e-11 71.6 119 31.1
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 1.0e-10 71.2 140 28.6
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 1.8e-10 70.5 73 46.6
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 1.8e-10 70.5 73 46.6
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-10 70.5 179 28.5
BNapus_Darmor_BZH_scaffold_65p00030 Brassica napus HOM05D027739 ORTHO05D024662 2.3e-10 70.1 75 46.7
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 3.9e-10 69.3 95 33.7
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 5.1e-10 68.9 95 32.6
BcaB07g33058 Brassica carinata HOM05D003421 ORTHO05D003268 5.1e-10 68.9 130 36.9
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 8.7e-10 68.2 108 33.3
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 1.1e-09 67.8 125 29.6
C08p08930 Brassica napus HOM05D008596 ORTHO05D032749 1.5e-09 67.4 118 37.3
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 1.5e-09 67.4 125 30.4
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.9e-09 67.0 102 32.4
AL7G45790 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.3e-09 66.2 116 26.7
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 3.3e-09 66.2 83 41.0
Sp6g10630 Schrenkiella parvula HOM05D010529 ORTHO05D012528 3.3e-09 66.2 97 29.9
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 4.3e-09 65.9 92 27.2
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.3e-09 65.9 94 30.9
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 5.6e-09 65.5 92 27.2
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 5.6e-09 65.5 88 28.4
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 7.4e-09 65.1 92 27.2
BcaB01g01120 Brassica carinata HOM05D007986 ORTHO05D013025 9.6e-09 64.7 65 49.2
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 9.6e-09 64.7 88 28.4
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 9.6e-09 64.7 92 27.2
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 1.3e-08 64.3 125 29.6
BolC8t48644H Brassica oleracea HOM05D002078 ORTHO05D005680 2.8e-08 63.2 97 29.9
Sp4g04760 Schrenkiella parvula HOM05D010772 ORTHO05D005680 3.7e-08 62.8 88 30.7
BcaC03g17295 Brassica carinata HOM05D003421 ORTHO05D003268 4.8e-08 62.4 54 50.0
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-08 62.4 98 34.7
AUR62022261 Chenopodium quinoa HOM05D007445 ORTHO05D009408 8.1e-08 61.6 184 25.5
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.4e-07 60.8 94 34.0
BcaC05g26653 Brassica carinata HOM05D009676 ORTHO05D005680 1.8e-07 60.5 84 27.4
BcaB08g35469 Brassica carinata HOM05D009676 ORTHO05D005680 2.4e-07 60.1 114 24.6
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 3.1e-07 59.7 115 27.0
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.3e-07 58.9 94 31.9
RcHm_v2.0_Chr4g0419581 Rosa chinensis HOM05D031301 ORTHO05D013876 6.9e-07 58.5 81 35.8
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 9.0e-07 58.2 94 30.9
AUR62014080 Chenopodium quinoa HOM05D007445 ORTHO05D009408 9.0e-07 58.2 124 26.6
Carub.0005s0837 Capsella rubella HOM05D010629 ORTHO05D005680 1.5e-06 57.4 109 27.5
BolC7t42956H Brassica oleracea HOM05D003421 ORTHO05D042986 2.0e-06 57.0 55 49.1
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 2.0e-06 57.0 93 31.2
CARHR181090 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.4e-06 56.2 67 35.8
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-06 55.8 82 34.1
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.5e-06 55.8 95 29.5
BolC7t41400H Brassica oleracea HOM05D003421 ORTHO05D003268 7.6e-06 55.1 109 37.6
SpUn0389_0010 Schrenkiella parvula HOM05D010529 ORTHO05D012528 9.9e-06 54.7 72 31.9


User provided reference genes

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