Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 8.6e-188 660.2 345 100.0
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-142 508.8 294 94.6
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 6.7e-132 474.6 252 100.0
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 7.2e-102 374.8 344 64.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-84 316.6 425 49.9
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-81 306.6 253 73.5
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 7.0e-81 305.1 396 53.3
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-78 297.4 276 66.3
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 6.8e-76 288.5 348 54.0
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-75 287.0 366 52.7
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-75 286.2 252 70.2
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 4.4e-75 285.8 251 68.1
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-74 283.9 343 55.4
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-74 282.3 368 52.7
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-73 280.8 302 60.3
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-73 280.4 391 49.9
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 4.1e-73 279.3 333 56.5
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.6e-72 277.3 364 52.7
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-70 270.8 356 52.8
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-70 270.4 300 60.0
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-70 270.4 300 58.0
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-70 270.4 300 58.0
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 6.8e-68 261.9 384 47.4
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-64 251.1 237 67.5
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 4.6e-64 249.2 219 68.0
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-63 246.5 260 62.7
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 6.6e-63 245.4 264 62.1
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-62 243.8 265 61.5
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 3.7e-58 229.6 366 48.1
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 6.4e-58 228.8 367 46.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 4.1e-57 226.1 257 58.8
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 4.1e-57 226.1 159 78.0
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-56 224.2 192 70.3
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 3.5e-56 223.0 165 74.5
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.3e-55 221.1 249 60.2
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.7e-55 220.7 360 46.9
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-55 220.7 227 59.5
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 6.6e-55 218.8 205 68.3
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 6.6e-55 218.8 383 43.6
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-54 217.2 259 57.9
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-54 216.5 183 69.4
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 3.3e-54 216.5 259 57.9
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 5.6e-54 215.7 257 56.8
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-53 214.2 300 52.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 8.1e-53 211.8 211 63.0
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 8.1e-53 211.8 388 42.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.1e-52 211.5 351 45.9
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 1.8e-52 210.7 136 83.8
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-52 209.9 234 60.3
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-51 206.8 233 57.5
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 7.6e-51 205.3 258 54.3
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 2.4e-49 200.3 311 49.2
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 7.1e-49 198.7 252 54.4
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 9.2e-49 198.4 333 44.4
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 2.7e-48 196.8 336 47.9
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-47 193.7 294 49.0
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 6.6e-47 192.2 430 36.5
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 8.6e-47 191.8 140 78.6
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-46 189.5 249 52.6
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 5.6e-46 189.1 152 73.0
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-45 187.2 257 52.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 2.1e-45 187.2 120 84.2
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-44 184.9 213 59.2
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.1e-44 184.9 330 43.3
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.4e-44 184.5 380 39.7
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-43 181.4 236 53.8
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 2.0e-43 180.6 252 51.6
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-43 179.5 256 50.4
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 7.6e-43 178.7 127 78.0
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 2.2e-42 177.2 378 39.7
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-42 176.8 194 60.8
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.9e-42 176.8 330 42.4
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 3.8e-42 176.4 149 71.8
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 3.8e-42 176.4 182 62.1
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 4.9e-42 176.0 198 59.6
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.2e-40 171.4 119 79.0
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-40 171.0 176 63.1
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 2.1e-40 170.6 202 56.9
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-40 170.2 256 49.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 1.7e-39 167.5 348 40.5
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-39 166.0 148 68.9
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 8.7e-39 165.2 252 48.0
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 1.5e-38 164.5 380 35.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-38 162.9 202 56.4
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.6e-37 161.0 267 46.4
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 3.6e-37 159.8 129 72.1
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 1.4e-36 157.9 283 44.2
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 1.8e-36 157.5 295 43.7
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 2.4e-36 157.1 167 56.3
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-36 157.1 181 58.0
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-35 151.8 148 66.2
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-34 151.4 148 64.9
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 3.8e-34 149.8 152 60.5
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-34 149.1 174 58.6
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-33 146.7 254 45.3
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 1.2e-32 144.8 290 43.1
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 7.9e-32 142.1 152 59.2
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 3.9e-31 139.8 270 43.3
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 6.7e-31 139.0 264 43.6
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.1e-30 138.3 341 37.0
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-29 134.4 137 65.7
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-29 134.0 127 66.9
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.1e-28 131.7 280 40.4
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.4e-28 131.3 269 41.6
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-28 131.3 145 60.0
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.4e-28 131.3 269 41.6
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.8e-28 131.0 146 59.6
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 2.4e-28 130.6 227 48.5
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-28 130.6 127 63.8
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 3.1e-28 130.2 236 45.3
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 5.3e-28 129.4 234 45.7
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-27 126.7 176 50.6
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 3.4e-27 126.7 187 47.6
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-27 125.9 179 54.7
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 2.2e-26 124.0 127 63.0
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 3.5e-24 116.7 241 41.5
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-24 116.3 129 58.9
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 6.0e-24 115.9 179 50.3
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.3e-23 114.0 107 63.6
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-22 110.5 132 56.1
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 4.3e-22 109.8 227 39.6
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 9.6e-22 108.6 218 40.8
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 1.6e-21 107.8 215 40.5
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 4.8e-21 106.3 99 66.7
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 1.8e-20 104.4 210 42.9
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 3.1e-20 103.6 235 40.0
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 2.2e-18 97.4 210 42.4
C01p12180 Brassica napus HOM05D004489 ORTHO05D000199 2.2e-18 97.4 64 68.8
C02p45120 Brassica napus HOM05D004489 ORTHO05D000199 8.4e-18 95.5 64 67.2
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 8.4e-18 95.5 64 65.6
C03p69080 Brassica napus HOM05D004489 ORTHO05D000199 2.5e-17 94.0 64 67.2
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 2.5e-17 94.0 64 67.2
C04p33130 Brassica napus HOM05D004489 ORTHO05D024615 7.1e-17 92.4 64 67.2
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.6e-16 91.3 86 60.5
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 1.6e-16 91.3 46 82.6
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 1.0e-15 88.6 66 72.7
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 1.8e-15 87.8 163 47.2
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 1.9e-14 84.3 120 52.5
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 3.3e-14 83.6 101 55.4
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-13 81.3 78 62.8
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-13 81.3 78 61.5
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 3.7e-13 80.1 70 65.7
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 3.7e-13 80.1 117 51.3
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 2.6e-11 73.9 83 57.8
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 2.9e-10 70.5 209 33.5
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 5.0e-10 69.7 252 31.7
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 6.5e-10 69.3 139 39.6
BolC9t57004H Brassica oleracea HOM05D004489 ORTHO05D024615 1.9e-09 67.8 50 66.0
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 7.2e-09 65.9 87 52.9
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 7.2e-09 65.9 88 52.3
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 9.3e-09 65.5 88 52.3
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 9.3e-09 65.5 139 38.8
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 9.3e-09 65.5 139 39.6
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 9.3e-09 65.5 88 52.3
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 1.6e-08 64.7 88 52.3
A07p07190 Brassica napus HOM05D010967 ORTHO05D099114 1.6e-08 64.7 121 38.0
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 2.1e-08 64.3 88 52.3
A04p09670 Brassica napus HOM05D008277 ORTHO05D016104 2.1e-08 64.3 139 38.1
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 2.1e-08 64.3 88 52.3
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 2.1e-08 64.3 88 52.3
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 3.6e-08 63.5 140 38.6
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 4.6e-08 63.2 44 68.2
BolC9t54985H Brassica oleracea HOM05D004489 ORTHO05D024615 4.6e-08 63.2 49 63.3
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 4.6e-08 63.2 172 34.3
C09p20880 Brassica napus HOM05D004489 ORTHO05D024615 1.4e-07 61.6 49 61.2
BolC9t54428H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-07 61.6 48 75.0
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-07 61.2 86 50.0
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 1.8e-07 61.2 66 59.1
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 3.0e-07 60.5 52 65.4
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 6.7e-07 59.3 66 56.1
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 6.7e-07 59.3 66 60.6
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 1.1e-06 58.5 55 60.0
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 1.9e-06 57.8 62 62.9
BolC8t48749H Brassica oleracea HOM05D004489 ORTHO05D105588 7.4e-06 55.8 31 83.9
BcaB03g16365 Brassica carinata HOM05D000706 ORTHO05D001633 9.7e-06 55.5 153 39.2


User provided reference genes

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