Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 7.6e-55 216.9 105 100.0
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-54 214.9 105 99.0
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-27 126.7 97 63.9
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-27 126.7 97 63.9
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-27 124.4 97 62.9
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-27 124.4 97 62.9
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-27 124.4 97 62.9
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-23 112.8 89 61.8
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-23 112.5 97 58.8
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 5.5e-21 104.4 99 58.6
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-19 97.4 94 55.3
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 7.0e-16 87.4 96 43.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 7.0e-16 87.4 96 49.0
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-15 86.3 100 47.0
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-15 85.5 91 49.5
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-15 85.5 91 49.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-15 85.1 97 46.4
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-14 83.6 98 42.9
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-14 83.2 107 44.9
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-14 82.8 98 42.9
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.4 96 42.7
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.4 98 41.8
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-14 82.0 96 41.7
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 3.8e-14 81.6 98 42.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 3.8e-14 81.6 98 42.9
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 5.0e-14 81.3 81 45.7
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 6.5e-14 80.9 91 47.3
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-14 80.5 91 45.1
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 8.5e-14 80.5 91 45.1
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 8.5e-14 80.5 91 47.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-13 80.1 98 43.9
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.1e-13 80.1 98 43.9
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-13 79.3 96 40.6
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-13 79.3 101 42.6
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-13 79.0 96 41.7
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 2.5e-13 79.0 96 41.7
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-13 78.6 96 41.7
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-13 78.6 92 42.4
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-13 78.6 98 41.8
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-13 78.6 98 41.8
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-13 78.6 98 41.8
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 3.2e-13 78.6 98 42.9
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-13 78.2 96 45.8
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-13 78.2 107 43.0
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 5.5e-13 77.8 99 42.4
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 5.5e-13 77.8 90 47.8
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 7.2e-13 77.4 83 43.4
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 7.2e-13 77.4 96 42.7
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-12 76.6 96 41.7
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-12 76.6 98 40.8
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-12 76.6 91 45.1
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-12 76.6 98 40.8
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-12 76.6 91 45.1
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-12 75.9 83 42.2
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-12 75.9 83 42.2
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-12 75.5 98 40.8
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 2.7e-12 75.5 98 40.8
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-12 75.1 100 41.0
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-12 74.7 96 42.7
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-12 74.7 98 39.8
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 4.7e-12 74.7 98 39.8
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-12 73.9 91 44.0
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-11 73.6 83 42.2
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-11 73.2 89 41.6
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-11 73.2 94 41.5
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 1.4e-11 73.2 94 41.5
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-11 72.8 107 42.1
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-11 72.4 96 41.7
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 5.2e-11 71.2 81 45.7
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 8.8e-11 70.5 98 38.8
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 2.6e-10 68.9 61 54.1
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 4.4e-10 68.2 98 42.9
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 5.7e-10 67.8 61 54.1
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-10 67.0 83 42.2
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 66.2 94 40.4
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-09 65.9 75 37.3
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-09 65.9 75 37.3
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-09 65.1 61 52.5
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-09 64.3 98 38.8
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-08 63.5 82 40.2
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-08 63.2 75 34.7
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-08 63.2 75 34.7
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 62.4 65 46.2
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-08 62.4 65 46.2
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-08 62.4 65 46.2
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-08 62.0 58 51.7
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.1e-08 62.0 65 43.1
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-08 61.6 60 40.0
BolC4t26488H Brassica oleracea HOM05D003839 ORTHO05D039180 4.1e-08 61.6 48 66.7
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-07 60.1 71 42.3
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-07 59.3 52 50.0
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 58.9 50 52.0
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 3.5e-07 58.5 50 52.0
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.5e-07 58.2 65 40.0
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 5.9e-07 57.8 54 50.0
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 7.7e-07 57.4 41 58.5
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 7.7e-07 57.4 41 58.5
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.0e-06 57.0 64 42.2
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-06 56.2 66 43.9
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-06 56.2 52 50.0
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-06 55.8 49 53.1
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-06 55.8 62 41.9
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 2.3e-06 55.8 62 41.9
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-06 55.8 41 56.1
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-06 55.8 62 41.9
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-06 55.8 75 40.0
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.3e-06 55.8 59 42.4
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.9e-06 55.5 80 35.0
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 3.8e-06 55.1 61 41.0
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 3.8e-06 55.1 88 37.5
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-06 54.7 66 42.4
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-06 54.7 75 37.3
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-06 54.7 75 37.3
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 6.6e-06 54.3 55 43.6
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 6.6e-06 54.3 91 29.7
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 8.6e-06 53.9 81 32.1


User provided reference genes

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