Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37355 Brassica carinata HOM05D008386 ORTHO05D010572 1.9e-44 182.2 96 100.0
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 1.0e-29 133.3 87 83.9
BolC3t20162H Brassica oleracea HOM05D008386 ORTHO05D010572 1.0e-29 133.3 89 85.4
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-29 131.7 89 79.8
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 2.5e-28 128.6 86 82.6
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 4.3e-28 127.9 87 79.3
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-27 125.2 87 80.5
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 4.7e-27 124.4 87 80.5
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 4.7e-27 124.4 83 84.3
BcaB08g35205 Brassica carinata HOM05D008386 ORTHO05D010572 6.2e-27 124.0 85 80.0
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 1.4e-26 122.9 87 79.3
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 8.9e-26 120.2 85 76.5
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 2.1e-22 109.0 80 75.0
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 4.6e-22 107.8 81 76.5
BcaC07g38207 Brassica carinata HOM05D008386 ORTHO05D010572 6.0e-22 107.5 78 75.6
BolC8t48816H Brassica oleracea HOM05D008386 ORTHO05D010572 7.8e-22 107.1 89 69.7
BcaC01g02121 Brassica carinata HOM05D008386 ORTHO05D010572 1.8e-18 95.9 69 78.3
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 5.2e-18 94.4 56 91.1
BcaC02g10591 Brassica carinata HOM05D008386 ORTHO05D010572 1.2e-11 73.2 47 85.1
BcaC04g20758 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-11 72.8 45 84.4
BcaC03g16398 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-11 72.0 43 88.4
BolC7t41206H Brassica oleracea HOM05D008386 ORTHO05D010572 3.6e-11 71.6 43 86.0
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 1.8e-10 69.3 56 69.6
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-09 66.6 41 87.8
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 9.9e-09 63.5 43 79.1
BraA01t02430Z Brassica rapa HOM05D008386 ORTHO05D010572 4.2e-07 58.2 49 65.3
BolC1t03080H Brassica oleracea HOM05D008386 ORTHO05D010572 1.2e-06 56.6 53 60.4
A04p08210 Brassica napus HOM05D008386 ORTHO05D010572 3.5e-06 55.1 39 74.4


User provided reference genes

Program Settings