Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37128 Brassica carinata HOM05D020385 ORTHO05D021781 5.1e-60 234.2 115 100.0
BolC3t21037H Brassica oleracea HOM05D020385 ORTHO05D021781 7.7e-16 87.4 48 87.5
A06p21450 Brassica napus HOM05D020385 ORTHO05D021781 1.2e-13 80.1 49 77.6
A06p21460 Brassica napus HOM05D020385 ORTHO05D021781 1.2e-13 80.1 49 77.6
BcaB06g26079 Brassica carinata HOM05D000471 ORTHO05D091218 2.2e-07 59.3 60 55.0
Carub.0001s3434 Capsella rubella HOM05D001967 ORTHO05D001929 5.0e-07 58.2 52 61.5
CARHR035220 Cardamine hirsuta HOM05D001967 ORTHO05D001929 5.0e-07 58.2 52 61.5
AL1G51420 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 6.5e-07 57.8 52 61.5
Sp1g32110 Schrenkiella parvula HOM05D001967 ORTHO05D001929 6.5e-07 57.8 52 61.5
AT1G42960 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 59.6
BcaB04g17216 Brassica carinata HOM05D000471 ORTHO05D093239 8.5e-07 57.4 37 70.3
BcaB04g17774 Brassica carinata HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
BcaC07g37452 Brassica carinata HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
A08p07660 Brassica napus HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
C08p09240 Brassica napus HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
BolC8t47773H Brassica oleracea HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
BraA08t32780Z Brassica rapa HOM05D001967 ORTHO05D001929 8.5e-07 57.4 52 61.5
Thhalv10005036m.g Eutrema salsugineum HOM05D001967 ORTHO05D001929 1.9e-06 56.2 52 59.6
TWI36G0255 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 4.2e-06 55.1 52 55.8
Sc15g0004110 Simmondsia chinensis HOM05D001967 ORTHO05D001929 9.4e-06 53.9 52 53.8


User provided reference genes

Program Settings